Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq327 84.2 1e-11 >seq327 Length=49259 Score = 84.2 bits (92), Expect = 1e-11 Identities = 135/193 (70%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 25406 CCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAG 25465 |||| |||| || |||| |||||| || ||||| || ||||||||||| |||||||| || Sbjct 24166 CCTCGCGAGTTGGGTCTGCAGCGGCTCAACGTGGTCGAGGTAGACGTGGGCGTCTCCGAG 24225 Query 25466 AGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAG 25525 | ||| |||||| ||| | |||| ||| || ||||||| ||| || || Sbjct 24226 CTGGAGGATAAACTCGTGCGGGACCGTGTCGGTGACGAGTGCGATCATGTGCGTCAGAAG 24285 Query 25526 AAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGA 25585 ||| |||||||| ||||| || |||| || | || | |||| | ||||| | Sbjct 24286 GGCGTACGAAGCGATGTTGAAGGGGACACCGAGTCCGAGGT-CGGCCGAGCGTTGGTACA 24344 Query 25586 GCTGACACGAGAG 25598 | | || ||||| Sbjct 24345 TCAGGCAGGAGAG 24357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340133313628482