Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02-
24] 1,034 sequences; 19,981,819 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq327 84.2 1e-11
>seq327
Length=49259
Score = 84.2 bits (92), Expect = 1e-11
Identities = 135/193 (70%), Gaps = 1/193 (1%)
Strand=Plus/Plus
Query 25406 CCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAG 25465
|||| |||| || |||| |||||| || ||||| || ||||||||||| |||||||| ||
Sbjct 24166 CCTCGCGAGTTGGGTCTGCAGCGGCTCAACGTGGTCGAGGTAGACGTGGGCGTCTCCGAG 24225
Query 25466 AGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAG 25525
| ||| |||||| ||| | |||| ||| || ||||||| ||| || ||
Sbjct 24226 CTGGAGGATAAACTCGTGCGGGACCGTGTCGGTGACGAGTGCGATCATGTGCGTCAGAAG 24285
Query 25526 AAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGA 25585
||| |||||||| ||||| || |||| || | || | |||| | ||||| |
Sbjct 24286 GGCGTACGAAGCGATGTTGAAGGGGACACCGAGTCCGAGGT-CGGCCGAGCGTTGGTACA 24344
Query 25586 GCTGACACGAGAG 25598
| | || |||||
Sbjct 24345 TCAGGCAGGAGAG 24357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340133313628482
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |