Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02-
24] 1,034 sequences; 19,981,819 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq473 154 2e-33
seq407 149 1e-31
>seq473
Length=26224
Score = 154 bits (170), Expect = 2e-33
Identities = 154/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516
|| || |||||||| || ||||||||||| || ||||||||||| ||||||||||| ||
Sbjct 23100 CGTGACAACATCCAGGGCATCACCAAGCCCGCGATCCGTCGTCTCGCTCGTCGTGGCGGT 23159
Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576
||||||||| ||||||| | |||| || |||| |||| || | ||||||||||||
Sbjct 23160 GTCAAGCGTATCTCTGGCCTCATCTACGAGGAGACCCGTGGCGTCCTCAAGATCTTCCTC 23219
Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636
||| | | |||| || | || ||| ||||||||||| || || ||||||||||||
Sbjct 23220 GAGAACATCATCCGCGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACTGTCACC 23279
Query 16637 TCCATGGATATCGTCTATGC 16656
|| | || | ||||| ||
Sbjct 23280 TCGCTCGACGTTGTCTACGC 23299
>seq407
Length=1790
Score = 149 bits (164), Expect = 1e-31
Identities = 153/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516
|| || |||||||| || ||||||||||| || ||||||||||| || |||||||| ||
Sbjct 1329 CGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGTCGTCTCGCCCGTCGTGGCGGT 1388
Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576
||||||||| ||||||| || |||| || |||| || | || | ||||||||||||
Sbjct 1389 GTCAAGCGTATCTCTGGCCTGATCTACGAGGAGACGCGCGGCGTCCTCAAGATCTTCCTC 1448
Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636
||| | | |||| || | || ||| ||||||||||| || || ||||||||||||
Sbjct 1449 GAGAACATCATCCGCGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACTGTCACC 1508
Query 16637 TCCATGGATATCGTCTATGC 16656
|| | || | ||||| ||
Sbjct 1509 TCGCTCGACGTTGTCTACGC 1528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074254606562
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |