Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq473 154 2e-33 seq407 149 1e-31 >seq473 Length=26224 Score = 154 bits (170), Expect = 2e-33 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || ||||||||||| ||||||||||| || Sbjct 23100 CGTGACAACATCCAGGGCATCACCAAGCCCGCGATCCGTCGTCTCGCTCGTCGTGGCGGT 23159 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| ||||||| | |||| || |||| |||| || | |||||||||||| Sbjct 23160 GTCAAGCGTATCTCTGGCCTCATCTACGAGGAGACCCGTGGCGTCCTCAAGATCTTCCTC 23219 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| | | |||| || | || ||| ||||||||||| || || |||||||||||| Sbjct 23220 GAGAACATCATCCGCGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACTGTCACC 23279 Query 16637 TCCATGGATATCGTCTATGC 16656 || | || | ||||| || Sbjct 23280 TCGCTCGACGTTGTCTACGC 23299 >seq407 Length=1790 Score = 149 bits (164), Expect = 1e-31 Identities = 153/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || ||||||||||| || |||||||| || Sbjct 1329 CGCGACAACATCCAGGGCATCACCAAGCCGGCGATCCGTCGTCTCGCCCGTCGTGGCGGT 1388 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| ||||||| || |||| || |||| || | || | |||||||||||| Sbjct 1389 GTCAAGCGTATCTCTGGCCTGATCTACGAGGAGACGCGCGGCGTCCTCAAGATCTTCCTC 1448 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| | | |||| || | || ||| ||||||||||| || || |||||||||||| Sbjct 1449 GAGAACATCATCCGCGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACTGTCACC 1508 Query 16637 TCCATGGATATCGTCTATGC 16656 || | || | ||||| || Sbjct 1509 TCGCTCGACGTTGTCTACGC 1528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074254606562