Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02-
24] 1,034 sequences; 19,981,819 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq64 91.5 1e-13
>seq64
Length=12022
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 104611 TCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAAGGATTCAAA 104670
|| || || || ||||| ||||||| || || | ||| | |||||||| |||
Sbjct 6542 TCGAAGAAGTTGGTCTTTCCCTCCATCGAGATCAGCTCCATCCAATCGAAAGGGTTCTCC 6483
Query 104671 GTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCACAAATTCGATG 104730
|| || | || |||| || ||| ||| | ||| || ||||||||||| ||||||
Sbjct 6482 GTGTTGTAGAGCTTGTCGTTCCCGAGCGCGACGAGCAGCCGGTCCGCCACAAACTCGATG 6423
Query 104731 TACTCGCACATAGAATGT-GCATTCATGCCCAGCATTGCGACGGGTAAAGCGTTAGTaaa 104789
|||| |||||| || || | ||||| || | || |||||||| | |||| || ||
Sbjct 6422 TACTGGCACAT-CAACGTCGAGTTCATACCGATCAAGGCGACGGGCAGTGCGTCGGTCAA 6364
Query 104790 aaaaTCTTTCTCGATGTCCACGGCTTC 104816
|| || |||||||| || ||||||||
Sbjct 6363 GAACTCCTTCTCGATCTCGACGGCTTC 6337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429930582000270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |