Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02-
24] 1,034 sequences; 19,981,819 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq243 102 2e-16
seq64 89.7 1e-12
>seq243
Length=9243
Score = 102 bits (112), Expect = 2e-16
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 243486 CGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGA 243545
||| |||||| | | |||||| || || || | | ||| | || ||| | |||
Sbjct 148 CGACACGGTCGAGCGCATCATCCGCGAGGCGGTCGCGATCGAGCAAGAGTTCCTGACCGA 207
Query 243546 CGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATT 243605
||| |||| | ||| || ||||||||||| || |||||| | ||||||||||| ||
Sbjct 208 CGCGCTTCCCGTCAAGCTGATCGGCATGAACTCGGACCTCATGTGCCAGTACATCGAGTT 267
Query 243606 CGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCC 243665
|| |||||||| | || ||||||| || | || || | ||||| | | |||||
Sbjct 268 TGTCGCCGACCGGTTGCTCGTCGCGCTCGGCAACGAAAAGATTTACAAGGCGACCAACCC 327
Query 243666 CTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGA 243716
|| | ||||||||| | || ||| | | || || || |||||||||||
Sbjct 328 GTTCGACTTTATGGACATGATCTCGATGGAGGGCAAGACCAACTTCTTCGA 378
>seq64
Length=12022
Score = 89.7 bits (98), Expect = 1e-12
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
|||||| | ||||| || || | ||| ||||| ||| | |||||| | || | ||
Sbjct 6328 ATCATCGCCGAAGCCGTCGAGATCGAGAAGGAGTTCTTGACCGACGCACTGCCC-GTCGC 6386
Query 243562 CTT-ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620
||| || || |||||||| | ||| | ||||||||||| || || || ||||| |
Sbjct 6387 CTTGATCGGTATGAACTCGACGTTGATGTGCCAGTACATCGAGTTTGTGGCGGACCGGCT 6446
Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680
|| ||||||| || | || || | |||||| | ||||||| || | | |||||
Sbjct 6447 GCTCGTCGCGCTCGGGAACGACAAGCTCTACAACACGGAGAACCCTTTCGATTGGATGGA 6506
Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGA 243716
||| || ||| | | || || || |||||||||||
Sbjct 6507 GCTGATCTCGATGGAGGGAAAGACCAACTTCTTCGA 6542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102865388907900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |