Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq985 156 5e-33 >seq985 Length=76026 Score = 156 bits (172), Expect = 5e-33 Identities = 478/728 (66%), Gaps = 11/728 (2%) Strand=Plus/Plus Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 || |||||||| |||||| | || | |||||||| |||| | |||||| || | | Sbjct 18342 GCGTCCTTGTAGAGCATGAAGGGATTGCCCGTCTCAACCTGGGCTTCGAGAATGGCGTAC 18401 Query 114650 CAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708 || | | || ||| | | | ||| ||||| || ||||||| ||||||||| | | Sbjct 18402 CACAGCTTCTGCGCCGAGATC-GTGCGCTTGGCGCGACCCTCCTTCTCGTACTTCTCGAA 18460 Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768 || || ||||| || || | |||| ||| || || || | | |||||||| Sbjct 18461 AAGCGCCCTGAACTCGTCGCCGTAGACCTCGTGGAGGCCGGGCGCTTCGGCGGGGCAGAA 18520 Query 114769 GAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGC 114828 || | ||| | | || ||| || || | |||||||||||| |||||||| || || Sbjct 18521 CAGCGGCCACTCGGCGTTCTGCTCGACGCGTTCCATGAAGAGGTCGGGGATCCACAGCGC 18580 Query 114829 TGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 114888 ||||||| || || ||| ||||||| | || || || || | || | || Sbjct 18581 GAAGAAGAGGTCTCGCGCGCGGACTTCTTCTTTGCCGTGGTTCTTGCGGAGGTCGAGGAA 18640 Query 114889 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 114945 ||| | ||| |||||||||||||| || ||||| | ||||| | || || | Sbjct 18641 GTCGAAGATGTCCGCGTGCCACGGCTCAAGGTAGATCGCGAACGCGCCGGGTCGCTTATT 18700 Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005 || | |||| || || | ||| ||| || || ||||| ||||| || | ||| || Sbjct 18701 GCCTCCTTGGTCCACGTAACGCGCCGTGTTGTTGAAGACGCGGAGCATAGGCACGATGCC 18760 Query 115006 ATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATG 115063 | || | ||| || || ||| ||| ||||| || | || | || | || || Sbjct 18761 GTTCGAGTAGCCGTTCGTGCCCGCGATGTACGA-AC-CGGTCGCGCGGATGTTGTGAATC 18818 Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123 | ||| || || || || ||| ||||| ||||||| | |||| || ||||| Sbjct 18819 GAAAGACCGATCCCGCCCGCAGTCTTGGAGATGAGCGCGCAAGTCTTGAGCGTGTCGTAG 18878 Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183 || || ||||||||||| ||| | | || ||||||||| ||| | ||| || Sbjct 18879 ATGCCTTCGATCGAGTCGTCCTGCATGGTGACGAGGAAGCAGGACGAGAGTTGCGGGTGG 18938 Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTA 115243 || ||||| |||||||| || || || | |||||| |||| | | |||||| Sbjct 18939 GGGGTACCGGCGTTGAACAGCGTGGGCGACGCGTGAGTGAAGTAGCGCTCCGACATCAAG 18998 Query 115244 TCGTAGGTCTCCA-AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 115302 | ||||||||| | || || | ||||| ||||| || |||| | || ||||| Sbjct 18999 TTGTAGGTCTCGATAGCACGCTTG-ATGTCGGGTCCGTGGATGCCGACGGCAACGCGCAT 19057 Query 115303 AAACATGT 115310 | ||||| Sbjct 19058 GAGCATGT 19065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597345879204720