Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02-
24] 1,034 sequences; 19,981,819 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq985 226 3e-54
>seq985
Length=76026
Score = 226 bits (250), Expect = 3e-54
Identities = 417/610 (68%), Gaps = 6/610 (1%)
Strand=Plus/Minus
Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783
||||| | ||||||||||| ||| |||||||| || ||| || |||| || |
Sbjct 19138 TACTTCGGTTTCAAAACTCTCGAGCGCTCGTACCTGCTGCGGATCGACGGCAAAGTGGCG 19079
Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843
||||| || || || |||| |||||||| ||| |||| || ||||| | |||||| |
Sbjct 19078 GAGCGTCCTCAGCACATGCTCATGCGCGTTGCCGTCGGCATCCACGGACCCGACATCAAG 19019
Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATG---GCCACCCCG 93900
|| | | | | | || ||| ||| | | || || || | ||
Sbjct 19018 CGTGCTATCGAGACCTACAACTTGATGTCGGA---GCGCTACTTCACTCACGCGTCGCCC 18962
Query 93901 ACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAAC 93960
|| ||||||||||| || ||||| || || | || || || ||||| | || |
Sbjct 18961 ACGCTGTTCAACGCCGGTACCCCCCACCCGCAACTCTCGTCCTGCTTCCTCGTCACCATG 18902
Query 93961 AAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAA 94020
||| |||||| ||| || || | ||||| |||||| || ||| |||||| ||
Sbjct 18901 CAGGACGACTCGATCGAAGGCATCTACGACACGCTCAAGACTTGCGCGCTCATCTCCAAG 18842
Query 94021 TACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGC 94080
||||| || ||||| | | ||| || | || || | ||||| ||||||
Sbjct 18841 ACTGCGGGCGGGATCGGTCTTTCGATTCACAACATCCGCGCGACCGGTTCGTACATCGCG 18782
Query 94081 GGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCG 94140
|| || || ||| ||| |||||| |||| ||||||||||| |||||||||||| |||||
Sbjct 18781 GGCACGAACGGCTACTCGAACGGCATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCG 18722
Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCC 94200
|| ||||||||||| || || | | | || | |||||| |||| || |||||
Sbjct 18721 CGTTACGTGGACCAAGGAGGCAATAAGCGACCCGGCGCGTTCGCGATCTACCTTGAGCCG 18662
Query 94201 TGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAG 94260
|||||||||||| | | ||| ||||||| || |||||||||||||| || |
Sbjct 18661 TGGCACGCGGACATCTTCGACTTCCTCGACCTCCGCAAGAACCACGGCAAAGAAGAAGTC 18602
Query 94261 AGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAG 94320
| || |||||||||||| ||| || ||| | || ||||| || ||| |||||||||||
Sbjct 18601 CGCGCGCGAGACCTCTTCTTCGCGCTGTGGATCCCCGACCTCTTCATGGAACGCGTCGAG 18542
Query 94321 AAAAACTCCG 94330
| ||| |||
Sbjct 18541 CAGAACGCCG 18532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494716805702640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |