Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02-
24] 1,034 sequences; 19,981,819 total letters
Query= NC_013693.1
Length=158006
Score E
Sequences producing significant alignments: (Bits) Value
seq159 84.2 2e-11
>seq159
Length=60006
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/204 (71%), Gaps = 9/204 (4%)
Strand=Plus/Minus
Query 9407 AACTCTATTGCCACCCACATCGGTGGTCCTCACGTTGATTATGTCGCCGACCAGATCGTG 9466
||| | || || ||| || || ||| | ||||| | |||||||||||||||||||||
Sbjct 22570 AACGCGATCGCGACCACCAAAGGCGGTTCGCACGTCAACTATGTCGCCGACCAGATCGTG 22511
Query 9467 GCTGCGATTCGTCCTCAGCTGGT---GAAGAAGTTCAAGACCG--AGC-TGAAACCTGCC 9520
| | | || ||| | || || ||||||| ||||| | | | | ||||| |
Sbjct 22510 -CAGGGTTTGGTCGAC--CTCGTCAAGAAGAAGCACAAGAACATTACCGTCAAACCGTTC 22454
Query 9521 GTGATCAAGAACCACATGTCCTTGTTCATCGCCGCCGACATCAACAACCCGCGCTTTGAC 9580
||||||||||||||| || | ||| || | | | ||| |||||||| |||||||
Sbjct 22453 CAGATCAAGAACCACATCGCCCTTTTCGTCAACTGCAAGATCGACAACCCGAGCTTTGAT 22394
Query 9581 AGCCAGACCAAGGAGCGCATGACC 9604
|||||||||||| |||||||
Sbjct 22393 TCGCAGACCAAGGAGAACATGACC 22370
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505484666526240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |