Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= NC_013693.1 Length=158006 Score E Sequences producing significant alignments: (Bits) Value seq159 84.2 2e-11 >seq159 Length=60006 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/204 (71%), Gaps = 9/204 (4%) Strand=Plus/Minus Query 9407 AACTCTATTGCCACCCACATCGGTGGTCCTCACGTTGATTATGTCGCCGACCAGATCGTG 9466 ||| | || || ||| || || ||| | ||||| | ||||||||||||||||||||| Sbjct 22570 AACGCGATCGCGACCACCAAAGGCGGTTCGCACGTCAACTATGTCGCCGACCAGATCGTG 22511 Query 9467 GCTGCGATTCGTCCTCAGCTGGT---GAAGAAGTTCAAGACCG--AGC-TGAAACCTGCC 9520 | | | || ||| | || || ||||||| ||||| | | | | ||||| | Sbjct 22510 -CAGGGTTTGGTCGAC--CTCGTCAAGAAGAAGCACAAGAACATTACCGTCAAACCGTTC 22454 Query 9521 GTGATCAAGAACCACATGTCCTTGTTCATCGCCGCCGACATCAACAACCCGCGCTTTGAC 9580 ||||||||||||||| || | ||| || | | | ||| |||||||| ||||||| Sbjct 22453 CAGATCAAGAACCACATCGCCCTTTTCGTCAACTGCAAGATCGACAACCCGAGCTTTGAT 22394 Query 9581 AGCCAGACCAAGGAGCGCATGACC 9604 |||||||||||| ||||||| Sbjct 22393 TCGCAGACCAAGGAGAACATGACC 22370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505484666526240