Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= NC_019910.1 Length=159624 Score E Sequences producing significant alignments: (Bits) Value seq159 87.8 2e-12 >seq159 Length=60006 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/205 (72%), Gaps = 11/205 (5%) Strand=Plus/Plus Query 117560 GGTCATGCGCTCCTTGGTCTGGCTGTCAAAGCGCGGGTTGTTGATGTCGGCGGCGATGAA 117619 ||||||| |||||||||||| ||||||| |||||||| ||| | | | || ||| Sbjct 22370 GGTCATGTTCTCCTTGGTCTGCGAATCAAAGCTCGGGTTGTCGATCTTGCAGTTGACGAA 22429 Query 117620 CAAGGACATGTGGTTCTTGATCATGGCA-GGTTTCA-GCT--CGGTCTTGAACTTCTTC- 117674 | || ||||||||||||||| ||| | ||||| | | | | ||||| ||||||| Sbjct 22430 AAGGGCGATGTGGTTCTTGATC-TGGAACGGTTTGACGGTAATGTTCTTGTGCTTCTTCT 22488 Query 117675 --ACCAGCTGAGGACGAATCGCGGCCACGATCTGGTCGGCGACATAATCAACGTGAGGAC 117732 || || | ||| || | | | ||||||||||||||||||||| | ||||| | || Sbjct 22489 TGACGAG--GTCGACCAAACCCTG-CACGATCTGGTCGGCGACATAGTTGACGTGCGAAC 22545 Query 117733 CACCGATGTGGGTGGCAATAGAGTT 117757 | || || ||| || || | ||| Sbjct 22546 CGCCTTTGGTGGTCGCGATCGCGTT 22570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510662199605760