Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq381 127 1e-24 seq544 105 4e-18 seq893 95.1 8e-15 >seq381 Length=90481 Score = 127 bits (140), Expect = 1e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| |||||| || ||||| || ||||| ||| |||| | || Sbjct 71 AGGACGAGGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCCGAGAGGGTGCGGCCGTCC 130 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || || |||||||| |||| | ||||||||||| Sbjct 131 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 190 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || || |||||| || | || || ||| Sbjct 191 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 250 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || ||||| |||||||| |||||||| |||||| Sbjct 251 TTACCCGTCAGGGTCTTGACAAAGATTTGCATG 283 >seq544 Length=109881 Score = 105 bits (116), Expect = 4e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| |||||||| || |||| | || Sbjct 82606 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCC 82665 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || || |||||||| | || | ||||||||||| Sbjct 82666 TCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 82725 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | ||| || ||| Sbjct 82726 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 82785 Query 34946 TTTCCCGTGAGGG 34958 || |||||||||| Sbjct 82786 TTGCCCGTGAGGG 82798 >seq893 Length=83276 Score = 95.1 bits (104), Expect = 8e-15 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 34760 AACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGC 34819 |||| ||||| ||||| | ||| ||||||||| ||||| |||||||| ||| |||| Sbjct 39268 AACCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGG 39209 Query 34820 TCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCC 34879 | || || || ||||| ||||| ||||| || || |||||||| | || | |||||| Sbjct 39208 CCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCC 39149 Query 34880 TTGTC 34884 ||||| Sbjct 39148 TTGTC 39144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325688695660046