Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq64 89.7 5e-13 >seq64 Length=12022 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 50502 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50561 ||||||||||| ||||| || ||||| || || ||||| | ||||| || ||| | || Sbjct 6337 GAAGCCGTCGAGATCGAGAAGGAGTTCTTGACCGACGCACTGCCCGTCGCCTTGATCGGT 6396 Query 50562 ATGAACGCAGAC-ATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTG-TTGTTGC 50619 |||||| | ||| |||||||| ||||||| |||||||| || ||| | || | || || Sbjct 6397 ATGAACTC-GACGTTGATGTGCCAGTACATCGAGTTTGTGGCGGACCGGCTGCTCGTCGC 6455 Query 50620 AGCTGGGACAACCGAAATACTATAATGCACGTA-ACCCCTTTCCGTT-TATGAATAACAT 50677 ||| || | ||| | || || |||| | | ||||||| || ||| | || Sbjct 6456 -GCTCGG--GAACGACAAGCTCTACAACACGGAGAACCCTTTCGATTGGATGGAGCTGAT 6512 Query 50678 ATCGTTGGAGGGCAAAACAAACTTTTTCGAAAG 50710 ||| ||||||| || || ||||| ||||| || Sbjct 6513 CTCGATGGAGGGAAAGACCAACTTCTTCGAGAG 6545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488537685568800