Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq544 86.0 1e-11 >seq544 Length=109881 Score = 86.0 bits (94), Expect = 1e-11 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | ||| || || || | ||| || || || || ||||| || || || || | Sbjct 82589 TACCACCGCGCAAGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCG 82648 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | ||||| || || || || || |||||||| || | || || || || | Sbjct 82649 AAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGG 82708 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || || ||||| || || || || || ||||| || | || | Sbjct 82709 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGA 82768 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGT 82786 | || | || ||||||||||| || Sbjct 82769 CCTCGAGGGTGATCGTCTTGCCCGT 82793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981814192630526