Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02-
24] 1,034 sequences; 19,981,819 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq985 132 6e-26
seq286 89.7 6e-13
>seq985
Length=76026
Score = 132 bits (146), Expect = 6e-26
Identities = 521/808 (64%), Gaps = 25/808 (3%)
Strand=Plus/Plus
Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415
|| ||||||||||||||| |||| | |||||||| ||| | || |||||| || | |
Sbjct 18342 GCGTCCTTGTAGAGCATGAAGGGATTGCCCGTCTCAACCTGGGCTTCGAGAATGGCGTAC 18401
Query 111416 CAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 111474
|| | | || ||| | | | || ||||| || |||||| ||||||||| | |
Sbjct 18402 CACAGCTTCTGCGCCGAGATCGTGCGC-TTGGCGCGACCCTCCTTCTCGTACTTCTCGAA 18460
Query 111475 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 111534
|| || ||||| || || | ||| ||| || || || | | | || |||||
Sbjct 18461 AAGCGCCCTGAACTCGTCGCCGTAGACCTCGTGGAGGCCGGGCGCTTCGGCGGGGCAGAA 18520
Query 111535 AAGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 111592
|| | ||| | | | ||| ||| || || | |||||| ||||| || ||||||||
Sbjct 18521 CAGCGGCCACT--CGGCGTTCTGCTCGACGCGTTCCATGAAGAGGTCGGGGATCCACAGC 18578
Query 111593 GATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 111652
| | ||||| |||| || | ||||| | || ||||| || | || |||
Sbjct 18579 GCGAAGAAGAGGTCTCGCGCGCGGACTTCTTCTTTGCCGTGGTTCTTGCGGAGGTCGAGG 18638
Query 111653 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---A 111709
|| || | ||| ||||||||||| |||||||| |||| |||| | || ||| |
Sbjct 18639 AAGTCGAAGATGTCCGCGTGCCACGGCTCAAGGTAGATCGCGAACGCGCCGGGTCGCTTA 18698
Query 111710 CGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATA 111769
|| |||| | || || ||||| ||| ||| || ||||| ||||| || | ||
Sbjct 18699 TTGCCTCCTTGGTCCACGTAACGCGCCGTGTTGTTGAAGACGCGGAGCATAGGCACGATG 18758
Query 111770 CCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGGA 111827
|| | || | || || || ||| ||| ||||| | || || | | || |
Sbjct 18759 CCGTTCGAGTAGCCGTTCGTGCCCGCGATGTACGA-----ACCGG-TCGCGC-GGAT-GT 18810
Query 111828 TGTGCATC------CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 111881
|||| ||| || || || || || ||| ||||| |||| || | | || |
Sbjct 18811 TGTGAATCGAAAGACCGATCCCGCCCGCAGTCTTGGAGATGAGCGCGCAAGTCTTGAGCG 18870
Query 111882 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 111941
| | ||||| || | ||| ||||| |||| ||| || |||||||| || | |
Sbjct 18871 TGTCGTAGATGCCTTCGATCGAGTCGTCCTGCATGGTGACGAGGAAGCAGGACGAGAGTT 18930
Query 111942 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGG 112001
|||| || ||||| || ||||| || || || | |||||| |||| | | |
Sbjct 18931 GCGGGTGGGGGGTACCGGCGTTGAACAGCGTGGGCGACGCGTGAGTGAAGTAGCGCTCCG 18990
Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061
||||| || ||| ||||| | || | ||||| ||||||||||||| || |
Sbjct 18991 ACATCAAGTTGTAGGTCTCGATAGCACGCTTGATGTCGGGTCCGTGGATGCCGACGGCAA 19050
Query 112062 CCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGC 112121
| ||||||| ||||| ||| || ||| | |||| |||| ||| | || ||
Sbjct 19051 CGCGCATGAGCATGTGCTGAGGACGCTCCGCCACTTTGCCGTCGATCCGCAGCAGGTACG 19110
Query 112122 TCTTCTCAAGGGTTTTGAGACCAAAGTA 112149
||| || ||||||| ||| |||||
Sbjct 19111 AGCGCTCGAGAGTTTTGAAACCGAAGTA 19138
>seq286
Length=50606
Score = 89.7 bits (98), Expect = 6e-13
Identities = 165/239 (69%), Gaps = 10/239 (4%)
Strand=Plus/Plus
Query 11620 CTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGG----TTGATTTTCGCGGG 11675
|||||| | ||| |||||||| || || |||| || || || | || ||| |
Sbjct 25535 CTTGCCGATCGCGTCAATCTCGTCGATAAAGATGATCGCCGGCGCGTTCTTCTTGGCGAG 25594
Query 11676 CGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGT 11735
|| |||| || ||||| |||| | || || || || ||||||||||| ||||| |
Sbjct 25595 CG----CAAACAGGTCGCGGACCCGACTCGCGCCGACTCCGACAAACATCTCGACAAACT 25650
Query 11736 TTGCGGCAGAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGG 11794
| | ||| || | || ||| ||||| | ||| || ||| | ||| |||||||
Sbjct 25651 CGGAACCCGAG-ACGGAGAAGAAAGGGACGCCGGCTTCGCCTGCGGTCGCTTTGGCGAGG 25709
Query 11795 AGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853
|| |||||||| || || ||| |||| | | |||||| |||||||||||||| ||
Sbjct 25710 AGCGTCTTTCCGGTTCCGGGCGGGCCCGACAAGATGGCGCCGCGGGGGATCTTGGCTCC 25768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628023882686400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |