Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq327 107 2e-18 >seq327 Length=49259 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 29857 CCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAG 29916 |||| |||| || |||| |||||| || |||| || ||||||||||| |||||||| || Sbjct 24166 CCTCGCGAGTTGGGTCTGCAGCGGCTCAACGTGGTCGAGGTAGACGTGGGCGTCTCCGAG 24225 Query 29917 GTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAG 29976 | | ||| |||||| ||| | |||||||| | || ||||||| ||| || || Sbjct 24226 CTGGAGGATAAACTCGTGCGGGACCGTGTCGGTGACGAGTGCGATCATGTGCGTCAGAAG 24285 Query 29977 AGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAG 30036 | ||| |||||||| ||||| || ||||| || | ||| |||| | ||||| | Sbjct 24286 GGCGTACGAAGCGATGTTGAAGGGGACACCGAGTCCGAGGTCGGCCGAGCGTTGGTACAT 24345 Query 30037 CTGACACGAGAG 30048 | | || ||||| Sbjct 24346 CAGGCAGGAGAG 24357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406305279727128