Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq381 98.7 6e-16 >seq381 Length=90481 Score = 98.7 bits (108), Expect = 6e-16 Identities = 165/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||||| | || | ||||| || ||||||||| ||||| ||||| || Sbjct 55 GCCGCCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCCGA 114 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || |||| || || || || |||||||| || | ||||| ||||| ||||| Sbjct 115 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGCGG 174 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || ||| | || ||||| | ||| | Sbjct 175 GATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGA 233 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATT 34713 | || | || ||||| ||||| || | || || ||||| || |||||| | ||| Sbjct 234 CCTCGAGCGTGATCGTCTTACCCGTCAGGGTCTTGACAAAGATTTGCATGGTTATT 289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314725633816922