Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq327 98.7 8e-16 >seq327 Length=49259 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 29629 CCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAG 29688 |||| |||| || || |||||| || |||||||| ||||||||||| || ||||| || Sbjct 24166 CCTCGCGAGTTGGGTCTGCAGCGGCTCAACGTGGTCGAGGTAGACGTGGGCGTCTCCGAG 24225 Query 29689 GGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAG 29748 | ||| |||||| ||| | |||||||| | || ||||||| ||| || || Sbjct 24226 CTGGAGGATAAACTCGTGCGGGACCGTGTCGGTGACGAGTGCGATCATGTGCGTCAGAAG 24285 Query 29749 AGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAG 29808 | ||| |||||||| ||||| || ||||| || | ||| | || | ||||| | Sbjct 24286 GGCGTACGAAGCGATGTTGAAGGGGACACCGAGTCCGAGGTCGGCCGAGCGTTGGTACAT 24345 Query 29809 CTGGCACGAGAG 29820 | |||| ||||| Sbjct 24346 CAGGCAGGAGAG 24357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406158081582124