Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02-
24] 1,034 sequences; 19,981,819 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq64 87.8 2e-12
>seq64
Length=12022
Score = 87.8 bits (96), Expect = 2e-12
Identities = 128/179 (72%), Gaps = 3/179 (2%)
Strand=Plus/Minus
Query 48189 GAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGAT 48248
||||| || | |||||||| || || || || ||||||||||| || | |||||| ||
Sbjct 6165 GAAAAGGTCAAGCCGGGCATCAGCCCGCGCTTCTTGAGCCAAAAGATGGACGCGAACGAC 6106
Query 48249 CCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA-ACTGGC 48307
|| || || |||||||| || || || || || ||| | |||| || ||| | |||| |
Sbjct 6105 CCGGAGAAAAATATGCCCTCGACCGCTGCGAACGCGATGAGTCGTTCGCCGAACACTGCC 6046
Query 48308 TTCG--TTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGT 48364
|||| | ||||| || ||||| || || |||||||| | ||||| | |||
Sbjct 6045 TTCGGATCAGAGATCCATCGCAACGCCCAGTCGGCTTTCTTCTTGATGCAAGGGACTGT 5987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694659821405760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |