Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq544 136 1e-26 >seq544 Length=109881 Score = 136 bits (150), Expect = 1e-26 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| || || ||||||||||||||||| || || ||||| ||||| |||||||| Sbjct 82796 CTCACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACACGATCGACAACGTCAAG 82737 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || ||||| || |||||||| || || ||||| ||||| Sbjct 82736 GCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATCTTTGCCGGC 82677 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || |||||||| || || | |||||| | || || ||| |||| || || || || || Sbjct 82676 AAGCAGCTCGAGGACGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTC 82617 Query 178122 CATCTTGT 178129 || || || Sbjct 82616 CACCTCGT 82609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203715252818596