Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq759 131 4e-25
>seq759
Length=2593
Score = 131 bits (144), Expect = 4e-25
Identities = 442/675 (65%), Gaps = 15/675 (2%)
Strand=Plus/Plus
Query 248826 CTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGA 248885
||||| ||||||||| || || || || |||||| ||| ||||||| ||| ||
Sbjct 747 CTTTGGTTTCAAAACTCTCGAACGTTCTTACCTCCTCCGAATCGATGGCAGAGTCGCTGA 806
Query 248886 ACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAG 248945
|||| ||| |||||| | ||||| || ||||| || |||||| ||| | ||| ||
Sbjct 807 ACGACCTCAACACATGCTCATGCGTGTCGCTGTTGGTATTCAC--GGAAGCGATATCGAT 864
Query 248946 CGTGCTCG--AGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACG 249003
|| || | | || |||| | ||| ||||| | | || || || | || ||
Sbjct 865 CGAGCACTTCAAACCTACAACCTCATGTCCGAACGATACTTCACCCACGCTTCTCCTACC 924
Query 249004 CTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCA 249062
||||||||||| || || | ||| | ||| || || ||||| || | | ||| |
Sbjct 925 CTCTTCAACGCTGGAACTCCTCACCC-TCAACTCTCTTCTTGCTTCCTCGTCACGATGAA 983
Query 249063 AGACGACTCTGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTTCTAAAT 249121
|||||||| |||| || || || ||||| || || || || | || || ||
Sbjct 984 GGACGACTCGATCGAAGGTATCTACGACACCCTCAAGACTTGCGCCCTC-ATCTCAAAGA 1042
Query 249122 TCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAG 249181
|| || |||||||||||||| | |||||| || |||| ||||| |||||| |
Sbjct 1043 CTGCAGGAGGAATCGGTCTCTCGATTCACAACATTCGTGCGACTGGTTCTTACATCGCTG 1102
Query 249182 GTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTT-TGAGTCCACCGCC 249240
| || ||||| | | |||||||| || | ||||| || || | ||| ||
Sbjct 1103 GAACCAATGGTTACTCGAACGGTATCGTCCCTATGCTTCG-TGTTTACAACAACACTGCT 1161
Query 249241 AGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTG 249297
| | | || | || | || | || || | ||||| || || | ||| |
Sbjct 1162 CGTTACGTCGATCAAGGAGGAAACAAGCGTCCTGGAGCTTTCGCAATCTACCTTGAACCG 1221
Query 249298 TGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATG 249357
||||||||||| || || || ||||| ||| | |||||| |||| || ||| |
Sbjct 1222 TGGCACGCCGACATTTTCGAATTCCTCGACCTCCGAAAGAATCACGGAAAGGAGGAAGTT 1281
Query 249358 AGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAG 249417
| || ||||| ||||||| || ||| ||| || ||||| | |||||| || ||| |
Sbjct 1282 CGTGCTCGTGATCTCTTCTTCGCCCTTTGGATCCCCGACCTCTTCATGAAGCGTGTCGAA 1341
Query 249418 GCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGC-CCCGGACCTCATCGATCTACA 249476
| | || || ||| | || | | || | || || ||||||| ||| ||| | |
Sbjct 1342 GAGAATGGTGACTGGCCTCTCTTCTGCCCTGCTGAAGCTCCCGGACTTCA-CGAGGTTTA 1400
Query 249477 CGGCGCCGACTTCGA 249491
||||| ||| |||||
Sbjct 1401 CGGCGACGAATTCGA 1415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073726612928256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |