Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq759 131 4e-25 >seq759 Length=2593 Score = 131 bits (144), Expect = 4e-25 Identities = 442/675 (65%), Gaps = 15/675 (2%) Strand=Plus/Plus Query 248826 CTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGA 248885 ||||| ||||||||| || || || || |||||| ||| ||||||| ||| || Sbjct 747 CTTTGGTTTCAAAACTCTCGAACGTTCTTACCTCCTCCGAATCGATGGCAGAGTCGCTGA 806 Query 248886 ACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAG 248945 |||| ||| |||||| | ||||| || ||||| || |||||| ||| | ||| || Sbjct 807 ACGACCTCAACACATGCTCATGCGTGTCGCTGTTGGTATTCAC--GGAAGCGATATCGAT 864 Query 248946 CGTGCTCG--AGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACG 249003 || || | | || |||| | ||| ||||| | | || || || | || || Sbjct 865 CGAGCACTTCAAACCTACAACCTCATGTCCGAACGATACTTCACCCACGCTTCTCCTACC 924 Query 249004 CTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCA 249062 ||||||||||| || || | ||| | ||| || || ||||| || | | ||| | Sbjct 925 CTCTTCAACGCTGGAACTCCTCACCC-TCAACTCTCTTCTTGCTTCCTCGTCACGATGAA 983 Query 249063 AGACGACTCTGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTTCTAAAT 249121 |||||||| |||| || || || ||||| || || || || | || || || Sbjct 984 GGACGACTCGATCGAAGGTATCTACGACACCCTCAAGACTTGCGCCCTC-ATCTCAAAGA 1042 Query 249122 TCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAG 249181 || || |||||||||||||| | |||||| || |||| ||||| |||||| | Sbjct 1043 CTGCAGGAGGAATCGGTCTCTCGATTCACAACATTCGTGCGACTGGTTCTTACATCGCTG 1102 Query 249182 GTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTT-TGAGTCCACCGCC 249240 | || ||||| | | |||||||| || | ||||| || || | ||| || Sbjct 1103 GAACCAATGGTTACTCGAACGGTATCGTCCCTATGCTTCG-TGTTTACAACAACACTGCT 1161 Query 249241 AGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTG 249297 | | | || | || | || | || || | ||||| || || | ||| | Sbjct 1162 CGTTACGTCGATCAAGGAGGAAACAAGCGTCCTGGAGCTTTCGCAATCTACCTTGAACCG 1221 Query 249298 TGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATG 249357 ||||||||||| || || || ||||| ||| | |||||| |||| || ||| | Sbjct 1222 TGGCACGCCGACATTTTCGAATTCCTCGACCTCCGAAAGAATCACGGAAAGGAGGAAGTT 1281 Query 249358 AGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAG 249417 | || ||||| ||||||| || ||| ||| || ||||| | |||||| || ||| | Sbjct 1282 CGTGCTCGTGATCTCTTCTTCGCCCTTTGGATCCCCGACCTCTTCATGAAGCGTGTCGAA 1341 Query 249418 GCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGC-CCCGGACCTCATCGATCTACA 249476 | | || || ||| | || | | || | || || ||||||| ||| ||| | | Sbjct 1342 GAGAATGGTGACTGGCCTCTCTTCTGCCCTGCTGAAGCTCCCGGACTTCA-CGAGGTTTA 1400 Query 249477 CGGCGCCGACTTCGA 249491 ||||| ||| ||||| Sbjct 1401 CGGCGACGAATTCGA 1415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073726612928256