Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq759 197 1e-45
>seq759
Length=2593
Score = 197 bits (218), Expect = 1e-45
Identities = 532/802 (66%), Gaps = 10/802 (1%)
Strand=Plus/Minus
Query 23143 ATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCA 23202
||||||||| |||||| | || | || || ||||| || | |||| ||| || |||
Sbjct 1539 ATCCTTGTACAGCATGAAAGGGTTACCAGTTTCGACTTGAGCTTCGAGGATTGCGTACCA 1480
Query 23203 CATAGTCTGAGCGTGAACACGTCG-CACGTACCTGCCTTCTTCCTCGTACTTTTGGTACA 23261
| | |||||| | | |||| | | | ||||| | ||||||||| | | | |
Sbjct 1479 AAGCTTTTGAGCGGGCAT-CGTCTTCTTGGCGCGTCCTTCCTTCTCGTACTTGTTGAAGA 1421
Query 23262 ACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATG 23320
|| || |||||| | |||||| ||| || ||||| | || || | || || | |
Sbjct 1420 GAGCTTCGAATTCGTCGCCGTAAACCTCGTGAAGTCCGGGAGCTT-CAGCAGGGCAGAAG 1362
Query 23321 AGACTCCA--CATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAG 23378
||| ||| || | || | ||| || || |||| || || || || ||||| || |
Sbjct 1361 AGAGGCCAGTCACC-ATTC-TCTTCGACACGCTTCATGAAGAGGTCGGGGATCCAAAGGG 1304
Query 23379 CGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAA 23438
|| |||| || || || || || || ||||| || ||| |||||| | || | |
Sbjct 1303 CGAAGAAGAGATCACGAGCACGAACTTCCTCCTTTCCGTGATTCTTTCGGAGGTCGAGGA 1244
Query 23439 AGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTAT 23498
| || || | ||| || |||||||| || ||||| | || || || || || | ||| |
Sbjct 1243 ATTCGAAAATGTCGGCGTGCCACGGTTCAAGGTAGATTGCGAAAGCTCCAGGACGCTTGT 1184
Query 23499 TGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGAC 23558
| || || |||||||||||||| || ||||||||||| || | ||||| || |||| ||
Sbjct 1183 TTCCTCCTTGATCGACGTAACGAGCAGTGTTGTTGTAAACACGAAGCATAGGGACGATAC 1124
Query 23559 CGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGT 23618
|||| || || || || | ||||| | || |||| ||||||||
Sbjct 1123 CGTTCGAGTAACCATTGGTTCCAGCGATGTAAGAACCAGTCGCACGAATGTTGTGAATCG 1064
Query 23619 GGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGA 23678
|| ||| || ||||| | | || || || | ||||| || || ||||||||||
Sbjct 1063 AGAGACCGATTCCTCCTGCAGTCTTTGAGATGAGGGCGCAAGTCTTGAGGGTGTCGTAGA 1004
Query 23679 TGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGG 23738
| || ||||| ||| || || ||| ||| | ||| || ||||| | ||| | | |
Sbjct 1003 TACCTTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCAAGAAGAGAGTTGAGGGTGAG 944
Query 23739 GCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGAT 23798
| || | || ||| || || || ||||| || ||||||| | ||||| || |
Sbjct 943 GAGTTCCAGCGTTGAAGAGGGTAGGAGAAGCGTGGGTGAAGTATCGTTCGGACATGAGGT 884
Query 23799 TGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCA 23858
|||| || | | || ||| || || |||||| ||||| | ||||| ||||| |
Sbjct 883 TGTAGGTTTGAAGTGCTCGATCGATATCGCTTCCGTGAATACCAACAGCGACACGCATGA 824
Query 23859 TCATGTATTGAGGTCTCTCGACCGTGAC-GCCGTTAATTTTGAACAGATATGAACGTTGC 23917
||||| |||||||| || | || | ||| | ||| || || || |||||||
Sbjct 823 GCATGTGTTGAGGTCGTTC-AGCGACTCTGCCATCGATTCGGAGGAGGTAAGAACGTTCG 765
Query 23918 ATCGTTTTAAATCCAAAATAGT 23939
| ||||| || ||||| ||||
Sbjct 764 AGAGTTTTGAAACCAAAGTAGT 743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445750285544640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |