Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq759 197 1e-45 >seq759 Length=2593 Score = 197 bits (218), Expect = 1e-45 Identities = 532/802 (66%), Gaps = 10/802 (1%) Strand=Plus/Minus Query 23143 ATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCA 23202 ||||||||| |||||| | || | || || ||||| || | |||| ||| || ||| Sbjct 1539 ATCCTTGTACAGCATGAAAGGGTTACCAGTTTCGACTTGAGCTTCGAGGATTGCGTACCA 1480 Query 23203 CATAGTCTGAGCGTGAACACGTCG-CACGTACCTGCCTTCTTCCTCGTACTTTTGGTACA 23261 | | |||||| | | |||| | | | ||||| | ||||||||| | | | | Sbjct 1479 AAGCTTTTGAGCGGGCAT-CGTCTTCTTGGCGCGTCCTTCCTTCTCGTACTTGTTGAAGA 1421 Query 23262 ACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATG 23320 || || |||||| | |||||| ||| || ||||| | || || | || || | | Sbjct 1420 GAGCTTCGAATTCGTCGCCGTAAACCTCGTGAAGTCCGGGAGCTT-CAGCAGGGCAGAAG 1362 Query 23321 AGACTCCA--CATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAG 23378 ||| ||| || | || | ||| || || |||| || || || || ||||| || | Sbjct 1361 AGAGGCCAGTCACC-ATTC-TCTTCGACACGCTTCATGAAGAGGTCGGGGATCCAAAGGG 1304 Query 23379 CGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAA 23438 || |||| || || || || || || ||||| || ||| |||||| | || | | Sbjct 1303 CGAAGAAGAGATCACGAGCACGAACTTCCTCCTTTCCGTGATTCTTTCGGAGGTCGAGGA 1244 Query 23439 AGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTAT 23498 | || || | ||| || |||||||| || ||||| | || || || || || | ||| | Sbjct 1243 ATTCGAAAATGTCGGCGTGCCACGGTTCAAGGTAGATTGCGAAAGCTCCAGGACGCTTGT 1184 Query 23499 TGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGAC 23558 | || || |||||||||||||| || ||||||||||| || | ||||| || |||| || Sbjct 1183 TTCCTCCTTGATCGACGTAACGAGCAGTGTTGTTGTAAACACGAAGCATAGGGACGATAC 1124 Query 23559 CGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGT 23618 |||| || || || || | ||||| | || |||| |||||||| Sbjct 1123 CGTTCGAGTAACCATTGGTTCCAGCGATGTAAGAACCAGTCGCACGAATGTTGTGAATCG 1064 Query 23619 GGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGA 23678 || ||| || ||||| | | || || || | ||||| || || |||||||||| Sbjct 1063 AGAGACCGATTCCTCCTGCAGTCTTTGAGATGAGGGCGCAAGTCTTGAGGGTGTCGTAGA 1004 Query 23679 TGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGG 23738 | || ||||| ||| || || ||| ||| | ||| || ||||| | ||| | | | Sbjct 1003 TACCTTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCAAGAAGAGAGTTGAGGGTGAG 944 Query 23739 GCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGAT 23798 | || | || ||| || || || ||||| || ||||||| | ||||| || | Sbjct 943 GAGTTCCAGCGTTGAAGAGGGTAGGAGAAGCGTGGGTGAAGTATCGTTCGGACATGAGGT 884 Query 23799 TGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCA 23858 |||| || | | || ||| || || |||||| ||||| | ||||| ||||| | Sbjct 883 TGTAGGTTTGAAGTGCTCGATCGATATCGCTTCCGTGAATACCAACAGCGACACGCATGA 824 Query 23859 TCATGTATTGAGGTCTCTCGACCGTGAC-GCCGTTAATTTTGAACAGATATGAACGTTGC 23917 ||||| |||||||| || | || | ||| | ||| || || || ||||||| Sbjct 823 GCATGTGTTGAGGTCGTTC-AGCGACTCTGCCATCGATTCGGAGGAGGTAAGAACGTTCG 765 Query 23918 ATCGTTTTAAATCCAAAATAGT 23939 | ||||| || ||||| |||| Sbjct 764 AGAGTTTTGAAACCAAAGTAGT 743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445750285544640