Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq759 116 3e-21
>seq759
Length=2593
Score = 116 bits (128), Expect = 3e-21
Identities = 301/459 (66%), Gaps = 0/459 (0%)
Strand=Plus/Minus
Query 38091 ATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGA 38150
|||||||| | | || || ||||| || || |||||||| ||||| | || || |
Sbjct 1263 ATTCTTTCGGAGGTCGAGGAATTCGAAAATGTCGGCGTGCCACGGTTCAAGGTAGATTGC 1204
Query 38151 CATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATAT 38210
| ||||| || | || | ||||| |||| | || | | | ||||| || || |
Sbjct 1203 GAAAGCTCCAGGACGCTTGTTTCCTCCTTGATCGACGTAACGAGCAGTGTTGTTGTAAAC 1144
Query 38211 TCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTT 38270
| | |||||| || ||||| || || | || || | || | || |||| ||| |
Sbjct 1143 ACGAAGCATAGGGACGATACCGTTCGAGTAACCATTGGTTCCAGCGATGTAAGAACCAGT 1084
Query 38271 AGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCA 38330
|| || || || ||||| | || ||||| |||||| ||||| || | |||||
Sbjct 1083 CGCACGAATGTTGTGAATCGAGAGACCGATTCCTCCTGCAGTCTTTGAGATGAGGGCGCA 1024
Query 38331 TTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACA 38390
|| | || || | |||||||| || ||| ||||| || | | | || ||
Sbjct 1023 AGTCTTGAGGGTGTCGTAGATACCTTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCA 964
Query 38391 ACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAA 38450
| ||| | |||||| |||||||| ||||| || | |||||||| || || ||||
Sbjct 963 AGAAGAGAGTTGAGGGTGAGGAGTTCCAGCGTTGAAGAGGGTAGGAGAAGCGTGGGTGAA 904
Query 38451 CCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAAT 38510
|| ||| |||| || || |||| | | | ||| ||||| | ||||||||
Sbjct 903 GTATCGTTCGGACATGAGGTTGTAGGTTTGAAGTGCTCGATCGATATCGCTTCCGTGAAT 844
Query 38511 ACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549
||| | || || | ||| ||||| ||||| |||| |||
Sbjct 843 ACCAACAGCGACACGCATGAGCATGTGTTGAGGTCGTTC 805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468507862828480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |