Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq759 116 3e-21 >seq759 Length=2593 Score = 116 bits (128), Expect = 3e-21 Identities = 301/459 (66%), Gaps = 0/459 (0%) Strand=Plus/Minus Query 38091 ATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGA 38150 |||||||| | | || || ||||| || || |||||||| ||||| | || || | Sbjct 1263 ATTCTTTCGGAGGTCGAGGAATTCGAAAATGTCGGCGTGCCACGGTTCAAGGTAGATTGC 1204 Query 38151 CATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATAT 38210 | ||||| || | || | ||||| |||| | || | | | ||||| || || | Sbjct 1203 GAAAGCTCCAGGACGCTTGTTTCCTCCTTGATCGACGTAACGAGCAGTGTTGTTGTAAAC 1144 Query 38211 TCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTT 38270 | | |||||| || ||||| || || | || || | || | || |||| ||| | Sbjct 1143 ACGAAGCATAGGGACGATACCGTTCGAGTAACCATTGGTTCCAGCGATGTAAGAACCAGT 1084 Query 38271 AGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCA 38330 || || || || ||||| | || ||||| |||||| ||||| || | ||||| Sbjct 1083 CGCACGAATGTTGTGAATCGAGAGACCGATTCCTCCTGCAGTCTTTGAGATGAGGGCGCA 1024 Query 38331 TTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACA 38390 || | || || | |||||||| || ||| ||||| || | | | || || Sbjct 1023 AGTCTTGAGGGTGTCGTAGATACCTTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCA 964 Query 38391 ACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAA 38450 | ||| | |||||| |||||||| ||||| || | |||||||| || || |||| Sbjct 963 AGAAGAGAGTTGAGGGTGAGGAGTTCCAGCGTTGAAGAGGGTAGGAGAAGCGTGGGTGAA 904 Query 38451 CCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAAT 38510 || ||| |||| || || |||| | | | ||| ||||| | |||||||| Sbjct 903 GTATCGTTCGGACATGAGGTTGTAGGTTTGAAGTGCTCGATCGATATCGCTTCCGTGAAT 844 Query 38511 ACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 ||| | || || | ||| ||||| ||||| |||| ||| Sbjct 843 ACCAACAGCGACACGCATGAGCATGTGTTGAGGTCGTTC 805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468507862828480