Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq759 242 5e-59
seq1608 105 9e-18
>seq759
Length=2593
Score = 242 bits (268), Expect = 5e-59
Identities = 538/802 (67%), Gaps = 4/802 (0%)
Strand=Plus/Minus
Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877
|||||||| || || || || || |||||||||| | |||| ||| | || || | |
Sbjct 1541 GCATCCTTGTACAGCATGAAAGGGTTACCAGTTTCGACTTGAGCTTCGAGGATTGCGTAC 1482
Query 71878 CAGACGACTCGAGCCTTTATTATATTCTTGTATC-TCTTTTCTCTTTCGTATTGTGTATA 71936
|| | | |||| || | |||||| | || || || | ||||| | ||| |
Sbjct 1481 CAAAGCTTTTGAGCGGGCATCGTCTTCTTGGCGCGTCCTTCCT-TCTCGTACT-TGTTGA 1424
Query 71937 TAATCG-TTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACA 71995
| | |||||| ||||| || || | | || | ||| ||| |||| || || |
Sbjct 1423 AGAGAGCTTCGAATTCGTCGCCGTAAACCTCGTGAAGTCCGGGAGCTTCAGCAGGGCAGA 1364
Query 71996 TCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 72055
| | ||| || |||| || | || || ||||| ||||| || || |||||||| |
Sbjct 1363 AGAGAGGCCAGTCACCATTCTCTTCGACACGCTTCATGAAGAGGTCGGGGATCCAAAGGG 1304
Query 72056 CTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 72115
| | || ||||| | | | | ||||| ||||| ||||||| || |||||||
Sbjct 1303 CGAAGAAGAGATCACGAGCACGAACTTCCTCCTTTCCGTGATTCTTTCGGAGGTCGAGGA 1244
Query 72116 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGT 72175
| | | ||| || | ||||||||||| | ||| || || | | |||| || || ||||
Sbjct 1243 ATTCGAAAATGTCGGCGTGCCACGGTTCAAGGTAGATTGCGAAAGCTCCAGGACGCTTGT 1184
Query 72176 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 72235
||||||| ||||| | ||| | ||| ||||| || ||||| | | ||| || | ||||
Sbjct 1183 TTCCTCCTTGATCGACGTAACGAGCAGTGTTGTTGTAAACACGAAGCATAGGGACGATAC 1124
Query 72236 CATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTG 72295
| || || ||||||||| || | ||| || ||| | |||||||| ||| ||| |
Sbjct 1123 CGTTCGAGTAACCATTGGTTCCAGCGATGTAAGAACCAGTCGCACGAATGTTGTGAATCG 1064
Query 72296 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 72355
| ||||| ||||| ||||| | || ||||| | ||||| || | || || ||||
Sbjct 1063 AGAGACCGATTCCTCCTGCAGTCTTTGAGATGAGGGCGCAAGTCTTGAGGGTGTCGTAGA 1004
Query 72356 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 72415
| || || || || ||| |||| | | || || || ||| | ||| | ||
Sbjct 1003 TACCTTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCAAGAAGAGAGTTGAGGGTGAG 944
Query 72416 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGAT 72475
|||||| || || || | ||||||||||||||| || || || ||| |||| || |
Sbjct 943 GAGTTCCAGCGTTGAAGAGGGTAGGAGAAGCGTGGGTGAAGTATCGTTCGGACATGAGGT 884
Query 72476 TGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTA 72535
|||| || | || ||| || ||||| | | || || || || ||||||||||| |
Sbjct 883 TGTAGGTTTGAAGTGCTCGATCGATATCGCTTCCGTGAATACCAACAGCGACACGCATGA 824
Query 72536 ACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCA 72595
||| || ||||||| |||| ||| || || ||| | | ||| || ||| |
Sbjct 823 GCATGTGTTGAGGTCGTTCAGCGACTCTGCCATCGATTCGGAGGAGGTAAGAACGTTCGA 764
Query 72596 AAGTTTTAAAACCAAAATAGTT 72617
|||||| |||||||| |||||
Sbjct 763 GAGTTTTGAAACCAAAGTAGTT 742
>seq1608
Length=13696
Score = 105 bits (116), Expect = 9e-18
Identities = 124/163 (76%), Gaps = 5/163 (3%)
Strand=Plus/Minus
Query 42112 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGA 42171
||| || |||||||||||||| || |||||||| || ||||| || || || || || ||
Sbjct 13558 GGAGAAGGTGAGTCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATTGAAGCGAAAGA 13499
Query 42172 TCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 42231
|||||| ||||||||||| || || || || || || | || | |||||| | | |
Sbjct 13498 TCCAGAGAAGAAGATTCCCTCAACAGCGGCGAAAGCGACGAGACGTTCTCCAAAGACTG- 13440
Query 42232 ACTG-TCAT-GT--ATCCACTTTTGAGCCCAATCGGCCTTCTT 42270
| || |||| || |||||||| | ||||| |||||||||||
Sbjct 13439 ATTGTTCATCGTTGATCCACTTGAGTGCCCAGTCGGCCTTCTT 13397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671114938317920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |