Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq759 253 5e-62 >seq759 Length=2593 Score = 253 bits (280), Expect = 5e-62 Identities = 516/756 (68%), Gaps = 8/756 (1%) Strand=Plus/Plus Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506 |||||| || || || ||| | |||||||| ||| ||||||| || | ||| | || Sbjct 804 TGAACGACCTCAACACATGCTCATGCGTGTCGCTGTTGGTATTCACGGAAGCGATATCGA 863 Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAAC 363566 | || || |||| || || || | | || ||||| ||||| | || || Sbjct 864 TCGAGCACTTCAAACCTACAACCTCATGTCCGAACGATACTTCACCCACGCTTCTCCTAC 923 Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626 | | ||| |||||||||| | | || || | ||||||||||| || | | ||||| Sbjct 924 CCTCTTCAACGCTGGAACTCCTCACCCTCAACTCTCTTCTTGCTTCCTCGTCACGATGAA 983 Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686 |||||| || ||||| ||||||| ||||| || |||| ||| || || || || |||| Sbjct 984 GGACGACTCGATCGAAGGTATCTACGACACCCTCAAGACTTGCGCCCTCATCTCAAAGAC 1043 Query 363687 TGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGC- 363744 |||||| ||||| ||| | ||||| ||||| ||||||| || | ||||| |||| Sbjct 1044 TGCAGGAGGAATCGGTCTCTCGATTCACAACATTCGTGCGACTG-GTTCTTACA-TCGCT 1101 Query 363745 GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804 || || || |||||||| || | || || ||||||||||| | |||| ||||| Sbjct 1102 GGAACCAATGGTTACTCGAACGGTATCGTCCCTATGCTTCGTGTTTACAACAACACTGCT 1161 Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864 | |||||||| || || ||| ||||| || || || || || || || || || Sbjct 1162 CGTTACGTCGATCAAGGAGGAAACAAGCGTCCTGGAGCTTTCGCAATCTACCTTGAACCG 1221 Query 363865 CATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAAAAGAGGAATT 363923 || ||||| ||||| || || || || ||||| || || ||| ||||| |||||| | Sbjct 1222 TGGCACGCCGACATTTTCGAATTCCTCGACCTCCGAAAGAATCAC-GGAAAGGAGGAAGT 1280 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 ||||| |||||||| |||| || |||||| | | |||| || |||||||| || || Sbjct 1281 TCGTGCTCGTGATCTCTTCTTCGCCCTTTGGATCCCCGACCTCTTCATGAAGCGTGTCGA 1340 Query 363984 GGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043 | | | ||| | ||||| ||||| ||| ||| || ||| ||| || | Sbjct 1341 AGAGAATGGTGACTGGCCTCTCTTCTGCCCTGCTGAAGCTCCCGGACTTCACGAGGTTTA 1400 Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGAC 364103 || ||||| | | ||||| | | | ||||| || ||| ||| || ||||| Sbjct 1401 CGGCGACGAATTCGAAGCTCTCTTCAACAAGTACGAGAAGGAAGGACGCGCCAAGAAGAC 1460 Query 364104 AATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACC 364163 || ||||| || ||||| |||| || ||| | || | || | || || || | ||| Sbjct 1461 GATGCCCGCTCAAAAGCTTTGGTACGCAATCCTCGAAGCTCAAGTCGAAACTGGTA-ACC 1519 Query 364164 CTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGT 364198 || | ||| ||||||| ||| | |||| | |||| Sbjct 1520 CTTTCATGCTGTACAAGGATGCTGCCAACAGTAAGT 1555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303305305861544