Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq759 253 5e-62
>seq759
Length=2593
Score = 253 bits (280), Expect = 5e-62
Identities = 516/756 (68%), Gaps = 8/756 (1%)
Strand=Plus/Plus
Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506
|||||| || || || ||| | |||||||| ||| ||||||| || | ||| | ||
Sbjct 804 TGAACGACCTCAACACATGCTCATGCGTGTCGCTGTTGGTATTCACGGAAGCGATATCGA 863
Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAAC 363566
| || || |||| || || || | | || ||||| ||||| | || ||
Sbjct 864 TCGAGCACTTCAAACCTACAACCTCATGTCCGAACGATACTTCACCCACGCTTCTCCTAC 923
Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626
| | ||| |||||||||| | | || || | ||||||||||| || | | |||||
Sbjct 924 CCTCTTCAACGCTGGAACTCCTCACCCTCAACTCTCTTCTTGCTTCCTCGTCACGATGAA 983
Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686
|||||| || ||||| ||||||| ||||| || |||| ||| || || || || ||||
Sbjct 984 GGACGACTCGATCGAAGGTATCTACGACACCCTCAAGACTTGCGCCCTCATCTCAAAGAC 1043
Query 363687 TGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGC- 363744
|||||| ||||| ||| | ||||| ||||| ||||||| || | ||||| ||||
Sbjct 1044 TGCAGGAGGAATCGGTCTCTCGATTCACAACATTCGTGCGACTG-GTTCTTACA-TCGCT 1101
Query 363745 GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804
|| || || |||||||| || | || || ||||||||||| | |||| |||||
Sbjct 1102 GGAACCAATGGTTACTCGAACGGTATCGTCCCTATGCTTCGTGTTTACAACAACACTGCT 1161
Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864
| |||||||| || || ||| ||||| || || || || || || || || ||
Sbjct 1162 CGTTACGTCGATCAAGGAGGAAACAAGCGTCCTGGAGCTTTCGCAATCTACCTTGAACCG 1221
Query 363865 CATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAAAAGAGGAATT 363923
|| ||||| ||||| || || || || ||||| || || ||| ||||| |||||| |
Sbjct 1222 TGGCACGCCGACATTTTCGAATTCCTCGACCTCCGAAAGAATCAC-GGAAAGGAGGAAGT 1280
Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983
||||| |||||||| |||| || |||||| | | |||| || |||||||| || ||
Sbjct 1281 TCGTGCTCGTGATCTCTTCTTCGCCCTTTGGATCCCCGACCTCTTCATGAAGCGTGTCGA 1340
Query 363984 GGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043
| | | ||| | ||||| ||||| ||| ||| || ||| ||| || |
Sbjct 1341 AGAGAATGGTGACTGGCCTCTCTTCTGCCCTGCTGAAGCTCCCGGACTTCACGAGGTTTA 1400
Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGAC 364103
|| ||||| | | ||||| | | | ||||| || ||| ||| || |||||
Sbjct 1401 CGGCGACGAATTCGAAGCTCTCTTCAACAAGTACGAGAAGGAAGGACGCGCCAAGAAGAC 1460
Query 364104 AATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACC 364163
|| ||||| || ||||| |||| || ||| | || | || | || || || | |||
Sbjct 1461 GATGCCCGCTCAAAAGCTTTGGTACGCAATCCTCGAAGCTCAAGTCGAAACTGGTA-ACC 1519
Query 364164 CTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGT 364198
|| | ||| ||||||| ||| | |||| | ||||
Sbjct 1520 CTTTCATGCTGTACAAGGATGCTGCCAACAGTAAGT 1555
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303305305861544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |