Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq759 125 1e-23 seq1608 104 4e-17 >seq759 Length=2593 Score = 125 bits (138), Expect = 1e-23 Identities = 359/546 (66%), Gaps = 12/546 (2%) Strand=Plus/Minus Query 244903 CTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGG-GC 244961 |||||| | || | || || ||||| ||| ||| | ||||||| || ||||| || Sbjct 1437 CTCGTACTTGTTGAAGAGAGCTTCGAATTCGTCGCCGTAAACCTCGTGAAGTCCGGGAGC 1378 Query 244962 ACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGT 245021 | || ||||| | |||| ||| || || || | ||| | || ||||||||||| Sbjct 1377 TTCA-GCAGGGCAGAAGAGAGGCCAGTCACCATTCTCTTCGACACGCTTCATGAAGAGGT 1319 Query 245022 CGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTG-TTC 245080 |||||||||| ||||| |||||| || | | | || ||| || ||| ||| Sbjct 1318 CGGGGATCCAAAGGGCGAAGAAGAGATCACGAGCACGAACTTCCTCCTTTCC-GTGATTC 1260 Query 245081 TTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGG 245140 || | || || | || || || | |||| ||||||| || || | ||||| |||| Sbjct 1259 TTTCGGAGGTCGAGGAATTCGAAAATGTCGGCGTGCCACGGTTCAAGGTAGATTGCGAAA 1200 Query 245141 GCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGAT 245196 || || || |||||||| ||||| || || | | | ||||| |||| | | Sbjct 1199 GCTCCAGGACGCTTGTTTCCTCCTTGATCGA----CGTAACGAGCAGTGTTGTTGTAAAC 1144 Query 245197 GCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTT 245256 || || |||| || || ||||| |||| || ||||| || |||||| | || | Sbjct 1143 ACGAAGCATAGGGACGATACCGTTCGAGTAACCATTGGTTCCAGCGATGTAAGAACCAGT 1084 Query 245257 GCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCA 245316 | | | |||| || || | || | ||| || || ||| |||||||||||||| Sbjct 1083 CGCACGAATGTTGTGAATCGAGAGACCGATTCCTCCTGCAGTCTTTGAGATGAGGGCGCA 1024 Query 245317 GCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCA 245376 |||||| |||||| || || || || ||| |||||| ||| || ||||| Sbjct 1023 AGTCTTGAGGGTGTCGTAGATACCTTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCA 964 Query 245377 GGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAA 245436 || || || || || | || | | | |||||| || || || |||||||| || Sbjct 963 AGAAGAGAGTTGAGGGTGAGGAGTTCCAGCGTTGAAGAGGGTAGGAGAAGCGTGGGTGAA 904 Query 245437 GTAGCG 245442 ||| || Sbjct 903 GTATCG 898 >seq1608 Length=13696 Score = 104 bits (114), Expect = 4e-17 Identities = 129/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 |||||||| |||||||| |||||||| ||||| |||||| | | | || Sbjct 13385 CCCTGCATTGCCAAGAAGGCCGACTGGGCACTCAAGTGGATCAACGATGAACAATCAGTC 13444 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 || || || | || || || || |||| || ||||| ||||||||||| || | ||| Sbjct 13445 TTTGGAGAACGTCTCGTCGCTTTCGCCGCTGTTGAGGGAATCTTCTTCTCTGGATCTTTC 13504 Query 42753 GCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTC 42805 || || ||||||||||||||| || ||| || |||||||||||||||||||| Sbjct 13505 GCTTCAATCTTCTGGCTCAAGAAGCGTGGTCTC-ATGCCCGGACTCACCTTCTC 13557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944305062137920