Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq759 125 1e-23
seq1608 104 4e-17
>seq759
Length=2593
Score = 125 bits (138), Expect = 1e-23
Identities = 359/546 (66%), Gaps = 12/546 (2%)
Strand=Plus/Minus
Query 244903 CTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGG-GC 244961
|||||| | || | || || ||||| ||| ||| | ||||||| || ||||| ||
Sbjct 1437 CTCGTACTTGTTGAAGAGAGCTTCGAATTCGTCGCCGTAAACCTCGTGAAGTCCGGGAGC 1378
Query 244962 ACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGT 245021
| || ||||| | |||| ||| || || || | ||| | || |||||||||||
Sbjct 1377 TTCA-GCAGGGCAGAAGAGAGGCCAGTCACCATTCTCTTCGACACGCTTCATGAAGAGGT 1319
Query 245022 CGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTG-TTC 245080
|||||||||| ||||| |||||| || | | | || ||| || ||| |||
Sbjct 1318 CGGGGATCCAAAGGGCGAAGAAGAGATCACGAGCACGAACTTCCTCCTTTCC-GTGATTC 1260
Query 245081 TTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGG 245140
|| | || || | || || || | |||| ||||||| || || | ||||| ||||
Sbjct 1259 TTTCGGAGGTCGAGGAATTCGAAAATGTCGGCGTGCCACGGTTCAAGGTAGATTGCGAAA 1200
Query 245141 GCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGAT 245196
|| || || |||||||| ||||| || || | | | ||||| |||| | |
Sbjct 1199 GCTCCAGGACGCTTGTTTCCTCCTTGATCGA----CGTAACGAGCAGTGTTGTTGTAAAC 1144
Query 245197 GCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTT 245256
|| || |||| || || ||||| |||| || ||||| || |||||| | || |
Sbjct 1143 ACGAAGCATAGGGACGATACCGTTCGAGTAACCATTGGTTCCAGCGATGTAAGAACCAGT 1084
Query 245257 GCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCA 245316
| | | |||| || || | || | ||| || || ||| ||||||||||||||
Sbjct 1083 CGCACGAATGTTGTGAATCGAGAGACCGATTCCTCCTGCAGTCTTTGAGATGAGGGCGCA 1024
Query 245317 GCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCA 245376
|||||| |||||| || || || || ||| |||||| ||| || |||||
Sbjct 1023 AGTCTTGAGGGTGTCGTAGATACCTTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCA 964
Query 245377 GGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAA 245436
|| || || || || | || | | | |||||| || || || |||||||| ||
Sbjct 963 AGAAGAGAGTTGAGGGTGAGGAGTTCCAGCGTTGAAGAGGGTAGGAGAAGCGTGGGTGAA 904
Query 245437 GTAGCG 245442
||| ||
Sbjct 903 GTATCG 898
>seq1608
Length=13696
Score = 104 bits (114), Expect = 4e-17
Identities = 129/174 (74%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692
|||||||| |||||||| |||||||| ||||| |||||| | | | ||
Sbjct 13385 CCCTGCATTGCCAAGAAGGCCGACTGGGCACTCAAGTGGATCAACGATGAACAATCAGTC 13444
Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752
|| || || | || || || || |||| || ||||| ||||||||||| || | |||
Sbjct 13445 TTTGGAGAACGTCTCGTCGCTTTCGCCGCTGTTGAGGGAATCTTCTTCTCTGGATCTTTC 13504
Query 42753 GCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTC 42805
|| || ||||||||||||||| || ||| || ||||||||||||||||||||
Sbjct 13505 GCTTCAATCTTCTGGCTCAAGAAGCGTGGTCTC-ATGCCCGGACTCACCTTCTC 13557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944305062137920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |