Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq759 185 1e-41 seq1827 102 1e-16 seq1608 89.7 6e-13 >seq759 Length=2593 Score = 185 bits (204), Expect = 1e-41 Identities = 488/739 (66%), Gaps = 17/739 (2%) Strand=Plus/Minus Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 ||||||||||| |||||| | || | || || || ||| | | ||| || || | | Sbjct 1541 GCATCCTTGTACAGCATGAAAGGGTTACCAGTTTCGACTTGAGCTTCGAGGATTGCGTAC 1482 Query 114650 CAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 114709 || | | || |||| || ||||| || || |||| ||||||||| || || Sbjct 1481 CAAAGCTTTTGAGCGGGCATCGTCTTCTTGGCGCGTCCTTCCTTCTCGTACTTGTTGAAG 1422 Query 114710 AGGGCTTCAAACTCTTCACCCACGGCCTC-TGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768 || ||||| || || || || |||| ||| || || || || | | | |||||||| Sbjct 1421 AGAGCTTCGAATTCGTCGCCGTAAACCTCGTGA-AGTCCGGGAGCTTCAGCAGGGCAGAA 1363 Query 114769 GAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGC 114828 ||||| ||| | |||| ||| || |||||||||||||||||||| |||||||| || || Sbjct 1362 GAGAGGCCAGTCACCATTCTCTTCGACACGCTTCATGAAGAGGTCGGGGATCCAAAGGGC 1303 Query 114829 TGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 114888 |||||||||| ||| ||| |||| || | || ||||| || | || | || Sbjct 1302 GAAGAAGAGATCACGAGCACGAACTTCCTCCTTTCCGTGATTCTTTCGGAGGTCGAGGAA 1243 Query 114889 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG--- 114945 || | || || |||||||||||||| ||||| | |||| | || | |||| Sbjct 1242 TTCGAAAATGTCGGCGTGCCACGGTTCAAGGTAGATTGCGAAAGCTCC---AGGACGCTT 1186 Query 114946 ---ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGAT 115002 || | || | || || | || ||| || | || |||||||| || | ||| Sbjct 1185 GTTTCCTCCTTGATCGACGTAACGAGCAGTGTTGTTGTAAACACGAAGCATAGGGACGAT 1126 Query 115003 ACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGAT 115062 ||| | || | ||||| || || || ||| | | || | | | || || Sbjct 1125 ACCGTTCGAGTAACCATTGGTTCCAGCGATGTAAGAACCAGTCGCACGAATGTTGTGAAT 1066 Query 115063 GTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTA 115122 | ||| || || ||||| ||||||||| | ||||| | |||| || |||| Sbjct 1065 CGAGAGACCGATTCCTCCTGCAGTCTTTGAGATGAGGGCGCAAGTCTTGAGGGTGTCGTA 1006 Query 115123 GATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCT 115182 ||| || ||||||||||| |||| | | || |||||||| || | ||| || Sbjct 1005 GATACCTTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCAAGAAGAGAGTTGAGGGTG 946 Query 115183 TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTT 115242 || || ||||||||||||||||| || | |||||| |||| | || |||||| Sbjct 945 AGGAGTTCCAGCGTTGAAGAGGGTAGGAGAAGCGTGGGTGAAGTATCGTTCGGACATGAG 886 Query 115243 ATCGTAGGTCTCCAAGACGGCGGGA---ATGTCTTCCCCGTGAATACCGATCGAGACCCG 115299 | |||||| | ||| || || || || ||||||||||| | | ||| || Sbjct 885 GTTGTAGGT-TTGAAG--TGCTCGATCGATATCGCTTCCGTGAATACCAACAGCGACACG 829 Query 115300 CATAAACATGTATTGGGGT 115318 ||| | ||||| ||| ||| Sbjct 828 CATGAGCATGTGTTGAGGT 810 >seq1827 Length=8425 Score = 102 bits (112), Expect = 1e-16 Identities = 204/299 (68%), Gaps = 4/299 (1%) Strand=Plus/Plus Query 8637 TGGCTCGTGAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTC 8696 ||| |||| ||||| ||||| |||||||| || | | || | |||||| |||||| Sbjct 2159 TGGATCGTCAAGAACTACCGTGAATCCTACGGAATGTACGCCGCCAACGGTATCCTCTTC 2218 Query 8697 AACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGATGGTATC 8756 |||||||| || || || ||||| | |||||| || |||||| | || | || Sbjct 2219 AACCACGAATCTCCTCGACGTGGACGAACTTTCGTCACCCGAAAGATCTCTCGTGCTGTC 2278 Query 8757 AAACAAATCGTCGC--GGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGA 8814 ||||| |||| ||| | | | ||| | | | | || ||| | ||||| || Sbjct 2279 GCCGAAATC-TCGCTCGGGCAACAAG-AGTGCCTCTACCTCGGTAACTTGGACGCCAAGC 2336 Query 8815 GGGACTGGGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAG 8874 | || |||||||||||| ||||| || || | ||||||| | ||||||||||| | Sbjct 2337 GTGATTGGGGACACGCCCGTGACTACGTCGAGGGTATGTGGCGTATGCTTCAACAAGACG 2396 Query 8875 AGGCGGACGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 8933 || | || || | || |||| || || ||||| ||| | || | || ||||| ||| Sbjct 2397 AGCCCGATGATTTCGTTCTCGCCACTGGAGAGACCCACCCTGTTCGTGAATTCGTCGAG 2455 >seq1608 Length=13696 Score = 89.7 bits (98), Expect = 6e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 126092 GAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAA 126151 |||||| ||||| ||||||||||| |||||||| | |||||| || | | || || Sbjct 13557 GAGAAGGTGAGTCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATTGAAGCGAAAGAT 13498 Query 126152 CCCGAGAAGAAGATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAG 126205 || ||||||||||||||||| ||| ||||| || | |||||| || ||||| Sbjct 13497 CCAGAGAAGAAGATTCCCTCAACAGCGGCGAAAGCGACGAGACGTTCTCCAAAG 13444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597332005667360