Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq759 194 2e-44 >seq759 Length=2593 Score = 194 bits (214), Expect = 2e-44 Identities = 444/660 (67%), Gaps = 10/660 (2%) Strand=Plus/Plus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||||| ||||||||||| || || ||||||||| || |||||||| || | Sbjct 745 TACTTTGGTTTCAAAACTCTCGAACGTTCTTACCTCCTCCGAATCGATGGCAGAGTCGCT 804 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGC-- 93841 || ||||| || || |||| ||||| ||||| | || |||||||| ||| || Sbjct 805 GAACGACCTCAACACATGCTCATGCGTGTCGCTGTTGGTATTCACGGAAGCGATATCGAT 864 Query 93842 CGAATGTTTTGCGGGCTTTCAGAGACATG-CGGGACAAGAGGTATACCATGGCCACCCCG 93900 ||| || | | | || |||| | | || | | | ||| | | | || Sbjct 865 CGAGCACTT--CAAACCTACAACCTCATGTCCGAACGATACTTCACCCACG-CTTCTCCT 921 Query 93901 ACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAAC 93960 ||||| |||||||| || || || || || | ||||| || ||||| | |||| Sbjct 922 ACCCTCTTCAACGCTGGAACTCCTCACCCTCAACTCTCTTCTTGCTTCCTCGTCACGATG 981 Query 93961 AAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC--ATCTCAA 94018 |||| |||||| ||| || || | ||||| ||||||| ||| |||| || ||||||| Sbjct 982 AAGGACGACTCGATCGAAGGTATCTACGACACCCTCAAG-ACT-TGCGCCCTCATCTCAA 1039 Query 94019 AATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCC 94078 | || || |||||||| || | ||| || | ||||| | ||||| |||||| Sbjct 1040 AGACTGCAGGAGGAATCGGTCTCTCGATTCACAACATTCGTGCGACTGGTTCTTACATCG 1099 Query 94079 GCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGG 94138 || |||||||| ||| ||||| ||||||||||||| || || | ||||||| | | Sbjct 1100 CTGGAACCAATGGTTACTCGAACGGTATCGTCCCTATGCTTCGTGTTTACAACAACACTG 1159 Query 94139 CGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGC 94198 | || ||||| || || || || | | | || ||||||| |||| || || | Sbjct 1160 CTCGTTACGTCGATCAAGGAGGAAACAAGCGTCCTGGAGCTTTCGCAATCTACCTTGAAC 1219 Query 94199 CCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGG 94258 | |||||||| ||| | | ||| ||||||| |||||||| ||||| || || | Sbjct 1220 CGTGGCACGCCGACATTTTCGAATTCCTCGACCTCCGAAAGAATCACGGAAAGGAGGAAG 1279 Query 94259 AGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCG 94318 | || | || ||||||| ||| || ||| | || ||||| || ||||| || |||| Sbjct 1280 TTCGTGCTCGTGATCTCTTCTTCGCCCTTTGGATCCCCGACCTCTTCATGAAGCGTGTCG 1339 Query 94319 AGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTT 94378 | | || | |||| ||| || || || |||| ||||||||| ||| |||| Sbjct 1340 AAGAGAATGGTGACTGGCCTCTCTTCTGCCCTGCTGAAGCTCCCGGACTTCACGAGGTTT 1399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494705315756320