Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq759 176 6e-39 >seq759 Length=2593 Score = 176 bits (194), Expect = 6e-39 Identities = 438/653 (67%), Gaps = 19/653 (3%) Strand=Plus/Minus Query 116638 TTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC 116697 ||||| || || |||| ||||||||| || |||| || || || || || || | || Sbjct 1454 TTGGCGCGTCCTTCCTTCTCGTACTTGTTGAAGAGAGCTTCGAATTCGTCGCCGTAAACC 1395 Query 116698 TC-TGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAAC 116756 || ||| || || || || | | | || |||||||||| ||| | |||| ||| || || Sbjct 1394 TCGTGA-AGTCCGGGAGCTTCAGCAGGGCAGAAGAGAGGCCAGTCACCATTCTCTTCGAC 1336 Query 116757 CCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTC 116816 ||||||||||||||||| |||||||| || || |||||||||| ||| ||| |||| Sbjct 1335 ACGCTTCATGAAGAGGTCGGGGATCCAAAGGGCGAAGAAGAGATCACGAGCACGAACTTC 1276 Query 116817 TTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTC 116876 || | || ||||| || | || | || || | || || |||||||||||||| Sbjct 1275 CTCCTTTCCGTGATTCTTTCGGAGGTCGAGGAATTCGAAAATGTCGGCGTGCCACGGTTC 1216 Query 116877 CAGGTACACCGCGATTGACCC------CTTGCGACGACCAGCCTGGTTTACATACCTCGC 116930 ||||| | |||| | || |||| || | || | || || | || Sbjct 1215 AAGGTAGATTGCGAAAGCTCCAGGACGCTTG---TTTCCTCCTTGATCGACGTAACGAGC 1159 Query 116931 CGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTG-TCCCCC 116989 || ||| | || |||||||| || | |||||| | || | ||||| | ||| | Sbjct 1158 AGTGTTGTTGTAAACACGAAGCATAGGGACGATACCGTTCGAGTAACCATTGGTTCCAGC 1099 Query 116990 GA-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCAC 117048 || || || || | | || | | | ||| || | ||| || || ||||| | Sbjct 1098 GATGTAAGA-ACCAG-TCGCACGAATGTTGTGAATCGAGAGACCGATTCCTCCTGCAGTC 1041 Query 117049 TTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTA 117108 |||||||| | ||||| | |||| || ||||||| || ||||||||||| |||| Sbjct 1040 TTTGAGATGAGGGCGCAAGTCTTGAGGGTGTCGTAGATACCTTCGATCGAGTCGTCCTTC 981 Query 117109 TTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTT 117168 | | || ||||||||| || | ||| || || || ||||||||||||||||| Sbjct 980 ATCGTGACGAGGAAGCAAGAAGAGAGTTGAGGGTGAGGAGTTCCAGCGTTGAAGAGGGTA 921 Query 117169 GGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCA-AGACAGAGGG 117227 || | |||||| |||| | || |||||| | |||||| | | | || | Sbjct 920 GGAGAAGCGTGGGTGAAGTATCGTTCGGACATGAGGTTGTAGGTTTGAAGTGCTCGATCG 861 Query 117228 A-ATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGT 117279 | || ||| ||||||||||| | | ||| ||||| | ||||| ||| ||| Sbjct 860 ATATCGCTT--CCGTGAATACCAACAGCGACACGCATGAGCATGTGTTGAGGT 810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613485021714720