Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq759 176 6e-39
>seq759
Length=2593
Score = 176 bits (194), Expect = 6e-39
Identities = 438/653 (67%), Gaps = 19/653 (3%)
Strand=Plus/Minus
Query 116638 TTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC 116697
||||| || || |||| ||||||||| || |||| || || || || || || | ||
Sbjct 1454 TTGGCGCGTCCTTCCTTCTCGTACTTGTTGAAGAGAGCTTCGAATTCGTCGCCGTAAACC 1395
Query 116698 TC-TGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAAC 116756
|| ||| || || || || | | | || |||||||||| ||| | |||| ||| || ||
Sbjct 1394 TCGTGA-AGTCCGGGAGCTTCAGCAGGGCAGAAGAGAGGCCAGTCACCATTCTCTTCGAC 1336
Query 116757 CCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTC 116816
||||||||||||||||| |||||||| || || |||||||||| ||| ||| ||||
Sbjct 1335 ACGCTTCATGAAGAGGTCGGGGATCCAAAGGGCGAAGAAGAGATCACGAGCACGAACTTC 1276
Query 116817 TTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTC 116876
|| | || ||||| || | || | || || | || || ||||||||||||||
Sbjct 1275 CTCCTTTCCGTGATTCTTTCGGAGGTCGAGGAATTCGAAAATGTCGGCGTGCCACGGTTC 1216
Query 116877 CAGGTACACCGCGATTGACCC------CTTGCGACGACCAGCCTGGTTTACATACCTCGC 116930
||||| | |||| | || |||| || | || | || || | ||
Sbjct 1215 AAGGTAGATTGCGAAAGCTCCAGGACGCTTG---TTTCCTCCTTGATCGACGTAACGAGC 1159
Query 116931 CGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTG-TCCCCC 116989
|| ||| | || |||||||| || | |||||| | || | ||||| | ||| |
Sbjct 1158 AGTGTTGTTGTAAACACGAAGCATAGGGACGATACCGTTCGAGTAACCATTGGTTCCAGC 1099
Query 116990 GA-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCAC 117048
|| || || || | | || | | | ||| || | ||| || || ||||| |
Sbjct 1098 GATGTAAGA-ACCAG-TCGCACGAATGTTGTGAATCGAGAGACCGATTCCTCCTGCAGTC 1041
Query 117049 TTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTA 117108
|||||||| | ||||| | |||| || ||||||| || ||||||||||| ||||
Sbjct 1040 TTTGAGATGAGGGCGCAAGTCTTGAGGGTGTCGTAGATACCTTCGATCGAGTCGTCCTTC 981
Query 117109 TTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTT 117168
| | || ||||||||| || | ||| || || || |||||||||||||||||
Sbjct 980 ATCGTGACGAGGAAGCAAGAAGAGAGTTGAGGGTGAGGAGTTCCAGCGTTGAAGAGGGTA 921
Query 117169 GGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCA-AGACAGAGGG 117227
|| | |||||| |||| | || |||||| | |||||| | | | || |
Sbjct 920 GGAGAAGCGTGGGTGAAGTATCGTTCGGACATGAGGTTGTAGGTTTGAAGTGCTCGATCG 861
Query 117228 A-ATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGT 117279
| || ||| ||||||||||| | | ||| ||||| | ||||| ||| |||
Sbjct 860 ATATCGCTT--CCGTGAATACCAACAGCGACACGCATGAGCATGTGTTGAGGT 810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613485021714720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |