Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq315 93.3 3e-13
>seq315
Length=7320
Score = 93.3 bits (102), Expect = 3e-13
Identities = 196/287 (68%), Gaps = 4/287 (1%)
Strand=Plus/Minus
Query 635412 ACAAGGCAGGAACCAAAGAAGGATAT-AAATGTACCCTAATTTTGACAGAGGGAGATTCA 635470
|||| |||||||| || ||| | || ||||||||||| || ||||| || ||||| ||
Sbjct 5855 ACAATGCAGGAACGAA-GAATGGTAGCAAATGTACCCTCATCTTGACCGAAGGAGACTCT 5797
Query 635471 GCTAAAACATTCGCTATGTCTGGTCTTAATGTTATTGGAAGAGATTATTATGGAGTTTTC 635530
|| ||| | |||| | || ||||| ||| | ||| | || | |||||||| |||
Sbjct 5796 GCGAAAGCTCTCGCCGTATCCGGTCTCTCAGTTGTCGGACGCGACAACTATGGAGTCTTC 5737
Query 635531 CCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTAGTCCTaaaaaaaTTGCT-GATAA 635589
|| ||| | |||||| | | || ||| | || || | | |||| ||||| || ||
Sbjct 5736 CCTCTTCGTGGAAAATTGCTCAACGTTCGAGAAGCGACT-GGAAAAGCTTTGCTCGAAAA 5678
Query 635590 TGAGGAAATTACAGCAATCaaaaaaaTTGTTGGACTTGAACAAGGAAAAGTTTATGATGA 635649
| |||||| ||| |||||| | || | || | ||||||| || || ||| | |
Sbjct 5677 CGCCGAAATTCAAGCTATCAAACAGATCATGGGTTTACAACAAGGCAAGGTCTATCAGAA 5618
Query 635650 TCTCAAAGGTTTACGATATGGTAGTATTATGATTCTTGCTGATCAAG 635696
| | ||||||| |||||| | ||||| | || |||||||
Sbjct 5617 CACCGACTCGCTACGATACGGTAGTCTGATGATCATGGCAGATCAAG 5571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780678889433752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |