Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq1827 122 1e-22
seq1331 84.2 3e-11
>seq1827
Length=8425
Score = 122 bits (134), Expect = 1e-22
Identities = 253/374 (68%), Gaps = 2/374 (1%)
Strand=Plus/Plus
Query 22451 AGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAAAATACAC 22510
|||| ||||| || || || ||||| || || ||||||||| ||| || | ||| |
Sbjct 2052 AGGCCTCTACTTCGGAACTTTACGGAAAGGTGGTTGAAACTCCTCAATCCGAGACTACTC 2111
Query 22511 CGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGG-CGACAGTT 22569
| || ||||| ||||| || || || ||||| ||| | | | ||| || ||
Sbjct 2112 CCTTCTACCCTCGTTCCCCTTACGGTGTAGCGAAACTCTACGCTTTCTGGATCGTCAAG- 2170
Query 22570 AATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCACGAATCA 22629
|| || | ||||| ||||| |||| || ||| ||||| | ||||||||||||||
Sbjct 2171 AACTACCGTGAATCCTACGGAATGTACGCCGCCAACGGTATCCTCTTCAACCACGAATCT 2230
Query 22630 CCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAATATCAGT 22689
|| |||| || || ||||| || ||||| || | | | |||||| | |||
Sbjct 2231 CCTCGACGTGGACGAACTTTCGTCACCCGAAAGATCTCTCGTGCTGTCGCCGAAATCTCG 2290
Query 22690 GCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTGGGGTCAT 22749
|| ||||| | || | ||||| |||||| | || || || || |||||||| ||
Sbjct 2291 CTCGGGCAACAAGAGTGCCTCTACCTCGGTAACTTGGACGCCAAGCGTGATTGGGGACAC 2350
Query 22750 GCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACCGGAAGATTTT 22809
|| || || ||||| | |||||||| || | |||||||| | || || |||||
Sbjct 2351 GCCCGTGACTACGTCGAGGGTATGTGGCGTATGCTTCAACAAGACGAGCCCGATGATTTC 2410
Query 22810 GTTATTGCAACAGG 22823
||| | || || ||
Sbjct 2411 GTTCTCGCCACTGG 2424
>seq1331
Length=11049
Score = 84.2 bits (92), Expect = 3e-11
Identities = 176/260 (68%), Gaps = 13/260 (5%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||||||||| || || | ||| || || || ||||||| || || |||| |||
Sbjct 4274 TCGAAATCTTCTCCTCCGAGGTGAGTGTCACCAGCGGTCGAAAGAACCTCGAAGACACCG 4215
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCA---AAAATGA-- 7571
| || || | | ||| ||||| || || || || || || ||| | |||||
Sbjct 4214 TCGTCGATAGAGAGAAGCGAGACATCGAATGTTCCTCCTCCGAGATCATAGACAATGATG 4155
Query 7572 GTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTG 7631
|||||||| || || |||| ||||| ||||| |||||||| || || || |
Sbjct 4154 GTACGTTC---TC-----CTCCAGTCTTGTCGAGTCCGTAGGCGATAGCGGCGGCGGTAG 4103
Query 7632 GTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691
|||| || | | ||| || ||| || ||||| || || | ||||| || || ||||
Sbjct 4102 GTTCGTTGACGACACGGAGGACGTTGAGACCAGCGATCGTACCGGCATCCTTGGTAGCTT 4043
Query 7692 GTCGTTGCGAATCGTTAAAG 7711
| ||||| | ||||| |||
Sbjct 4042 GACGTTGAGCGTCGTTGAAG 4023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635109839949280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |