Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq759 156 5e-33
seq315 113 6e-20
seq1608 95.1 2e-14
>seq759
Length=2593
Score = 156 bits (172), Expect = 5e-33
Identities = 473/728 (65%), Gaps = 11/728 (2%)
Strand=Plus/Plus
Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678
||||| ||||||| ||||| | ||||| || || ||||| ||| | | | |
Sbjct 818 ACATGCTCATGCGTGTCGCTGTTGGTATTCACGGAAGCGATATCGATCGAGCACTTCAAA 877
Query 111679 CATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTG 111738
| ||| || |||||| | |||| |||||| | || ||||||||||||||||
Sbjct 878 CCTACAACCTCATGTCCGAACGATACTTCACCCACGCTTCTCCTACCCTCTTCAACGCTG 937
Query 111739 GTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCA 111798
| || || || ||| | || ||| ||||| | | | ||||| || || |||
Sbjct 938 GAACTCCTCACCCTCAACTCTCTTCTTGCTTCCTCGTCACGATGAAGGACGACTCGATCG 997
Query 111799 ATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCG 111858
| || || |||| ||| |||| || |||| ||||||||| || || || ||||
Sbjct 998 AAGGTATCTACGACACCCTCAAGACTTGCGCCCTCATCTCAAAGACTGCAGGAGGAATCG 1057
Query 111859 GGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAAT 111918
| | || || | | | || | ||| || || || |||||| | |
Sbjct 1058 GTCTCTCGATTCACAACATTCGTGCGACTGGTTCTTACATCGCTGGAACCAATGGTTACT 1117
Query 111919 CAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAG 111978
| | ||||| | || |||||||| || | ||| ||| || || || || | ||||
Sbjct 1118 CGAACGGTATCGTCCCTATGCTTCGTGTTTACAACAACACTGCTCGTTACGTCGATCAAG 1177
Query 111979 CTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATA 112032
|| ||||| ||| || ||||| |||| ||||| || |||||||| || |
Sbjct 1178 GAGGAAACAAGCGTCCT---GGAGCTTTCGCAATCTACCTTGAACCGTGGCACGCCGACA 1234
Query 112033 TCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCGAT 112091
| | || ||||| || | || || || || | ||||| | || ||| || |||
Sbjct 1235 TTTTCGAATTCCTCGACCTCCGAAAGAATCACGGAAAGGAGGAAGTTCG-TGCTCGTGAT 1293
Query 112092 CTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT 112151
||||||| ||| || ||||| || || |||||||||||| | || || |||| ||| |
Sbjct 1294 CTCTTCTTCGCCCTTTGGATCCCCGACCTCTTCATGAAGCGTGTCGAAGAGAATGGTGAC 1353
Query 112152 TGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTT 112211
||| ||||||| || || | | || ||||| || ||| | || || || ||
Sbjct 1354 TGGCCTCTCTTCTGCCCTGCTGAAGCTCCCGGACTTCACGAGGTTTACGGCGACGAATTC 1413
Query 112212 GAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCC 112271
||||| |||| || ||||||||| | ||| | || || | |||| |||| |||
Sbjct 1414 GAAGCTCTCTTCAACAAGTACGAGAAGGAAGGACGCGCCAAGAAGACGATGCCCGCTCAA 1473
Query 112272 GATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTAC 112331
| | ||| | || || ||| | ||||| ||| ||||||| || | ||||| |||
Sbjct 1474 AAGCTTTGGTACGCAATCCTCGAAGCTCAAGTCGAAACTGGTAACCCTTTCATGCTGTAC 1533
Query 112332 AAAGACGC 112339
|| || ||
Sbjct 1534 AAGGATGC 1541
>seq315
Length=7320
Score = 113 bits (124), Expect = 6e-20
Identities = 210/298 (70%), Gaps = 14/298 (5%)
Strand=Plus/Plus
Query 176764 ATCCGTCATGATCATGAGACGACCATACCGAAGC---TCGGAAACATCTTGATAGTCCTT 176820
||| | ||||||||| |||| ||| || || ||| |||| ||| ||||| ||||
Sbjct 5575 ATCTGCCATGATCATCAGACTACCGTATCGTAGCGAGTCGGTGT--TCT-GATAGACCTT 5631
Query 176821 ACCCTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTG-GTTT--GATGTGAG 176877
|| ||||| | ||||| ||||| |||| | | ||||| | | |||| || ||
Sbjct 5632 GCCTTGTTGTAAACCCATGATCTGTTTGATAGC-TTGAATTTCGGCGTTTTCGAGCAAAG 5690
Query 176878 CTGTGTGACAGAGGCATCACGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTA 176937
|| | ||| || || ||||| || | || ||||||||||||||||| || ||
Sbjct 5691 CTTTTC--CAGTCGCTTCTCGAACGTTGAGCAATTTTCCACGAAGAGGGAAGACTCCATA 5748
Query 176938 GTGATCGCGACCAACCACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTC 176997
|| ||||| || || || |||||||| | || ||||| | ||||||||| || || ||
Sbjct 5749 GTTGTCGCGTCCGACAACTGAGAGACCGGATACGGCGAGAGCTTTCGCAGAGTCTCCTTC 5808
Query 176998 TGTCACGATGAGTGTACACTTGCCA-GATTGTGCCGTACCCGCCTTGTTCGCATCATC 177054
|||| |||||| ||||| |||| | ||| | ||| || || ||||| || || ||
Sbjct 5809 GGTCAAGATGAGGGTACATTTGCTACCATTCT-TCGTTCCTGCATTGTTGGCGTCTTC 5865
>seq1608
Length=13696
Score = 95.1 bits (104), Expect = 2e-14
Identities = 132/182 (73%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGT 102165
||||||| || ||| ||||| || || ||||| | |||||| | ||| | | |
Sbjct 13380 CAGTTCCCTGCATTGCCAAGAAGGCCGACTGGGCACTCAAGTGGATCAACGATGAACAAT 13439
Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225
| || ||||| || || ||| |||| || || ||||||||| |||||||||||||
Sbjct 13440 CA-GT--CTTTGGAGAACGTCTCGTCGCTTTCGCCGCTGTTGAGGGAATCTTCTTCTCTG 13496
Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285
| || ||| | || | |||||||||||||| ||||||||||| || ||| |||||
Sbjct 13497 GATCTTTCGCTTCAATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGACTCACCTTCT 13556
Query 102286 CC 102287
||
Sbjct 13557 CC 13558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620719960162240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |