Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq759 149 7e-31 seq1014 141 1e-28 seq1608 93.3 5e-14 >seq759 Length=2593 Score = 149 bits (164), Expect = 7e-31 Identities = 487/743 (66%), Gaps = 18/743 (2%) Strand=Plus/Minus Query 110407 GCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGA-CTT-GAGAATGGCCT 110464 |||||||| || |||||| | ||| |||||||||| | || ||| ||| ||| || || | Sbjct 1541 GCATCCTTGTACAGCATGAAAGGGTTACCAGTTTC-GACT-TGAGCTTCGAGGATTGCGT 1484 Query 110465 TCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGT 110524 ||| | | ||||| | || || ||| | ||||||| |||||||||| || Sbjct 1483 ACCAAAGCTTTTGAGCGGGCATCGTCTTCTTGGCGCGTCCTTCCTTCTCGTACTTGTTGA 1424 Query 110525 ACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGA 110584 | | | || ||||| | ||||| || || ||| || || | | || |||| Sbjct 1423 AGAGAGCTTCGAATTCGTCGCCGTAAACCTCGTGAAGTCCGGGAGCTTCAGCAGGGCAGA 1364 Query 110585 AGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCG 110644 |||| | ||| | ||| ||| || || | ||||||||| ||||| || ||||| | | Sbjct 1363 AGAGAGGCCAGTCACCATTCTCTTCGACACGCTTCATGAAGAGGTCGGGGATCCAAAGGG 1304 Query 110645 CCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAA 110704 | |||| || ||||| |||| | || || | || || || || || || | | Sbjct 1303 CGAAGAAGAGATCACGAGCACGAACTTCCTCCTTTCCGTGATTCTTTCGGAGGTCGAGGA 1244 Query 110705 AGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACGAC 110764 | || | || || | |||||| ||||| || |||| |||| | ||| | |||| Sbjct 1243 ATTCGAAAATGTCGGCGTGCCACGGTTCAAGGTAGATTGCGAAAGCTCC---AGGACGCT 1187 Query 110765 -----CCGCCTGGTTA-ACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAA 110818 || ||| | | || || || || ||| ||| | || | |||||||| | | Sbjct 1186 TGTTTCCTCCTTGATCGACGTAACGAGCAGTGTTGTTGTAAACACGAAGCATAGGGACGA 1127 Query 110819 TTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGA 110878 | || | || | |||||| || || || || | | |||||||||| ||| | Sbjct 1126 TACCGTTCGAGTAACCATTGGTTCCAGCGATGTAAGAACCAGTCGCACGAATGTTGTGAA 1067 Query 110879 TATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTACCA 110937 | | ||| || || || || ||| || | || || ||| |||| || | Sbjct 1066 TCGAGAGACCGATTCCTCCTGCAGTCTTTGAGATGAGGGCGCAAGTCT-TGAGGGTGTCG 1008 Query 110938 TAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGA 110997 || ||||| || ||||| || |||| | | | || ||||||||||| | ||||| Sbjct 1007 TAGATACCTTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCAAGAAGAGAGTTGAGGG 948 Query 110998 CGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATC 111057 |||| ||||| || |||||||| ||||| | || || |||| | || |||||| Sbjct 947 TGAGGAGTTCCAGCGTTGAAGAGGGTAGGAGAAGCGTGGGTGAAGTATCGTTCGGACATG 888 Query 111058 TTGTTGTATGTGTCGAGTGC-GGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCG 111116 |||||| || | ||||| || | | ||| | ||||||||||||| || || || Sbjct 887 AGGTTGTAGGTTTGAAGTGCTCGATCG-ATATCGCTTCCGTGAATACCAACAGCGACACG 829 Query 111117 CATGAACATATATTGAGG-CGTT 111138 ||||| ||| | |||||| |||| Sbjct 828 CATGAGCATGTGTTGAGGTCGTT 806 >seq1014 Length=2994 Score = 141 bits (156), Expect = 1e-28 Identities = 373/558 (67%), Gaps = 21/558 (4%) Strand=Plus/Minus Query 11445 ATGAACACCCAAAATCTTCCTGCGTCCTTGAACACTGGGGA--GAGTCACCTGAATCTTA 11502 |||||| || || || | | |||| ||| |||| |||| ||| || | || | | Sbjct 1485 ATGAACTCCGAAGATTTGCTTGCGACCTCCAACATCGGGGTTTGAGACAGCG--ATTTGA 1428 Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 |||||||||||||| || || | | ||| ||| || | ||| | ||| ||| || Sbjct 1427 CGATCGAAACGACCAGGACGAATCAAAGCGGGATCGAGGACGTCGGATCTGTTGGTACCG 1368 Query 11563 GC---AATGACTACAATGCCAGTCTCATTGTC-GAAACCGTCCATTTCTGTGAGAAGCTG 11618 || || ||| || || |||| || ||||||||||||||| | | ||| Sbjct 1367 GCGAGAAGGACGACG-TGT---TCTCCGGTTCCGAAACCGTCCATTTCGACCAACAACTG 1312 Query 11619 GTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATA---CCACC--TGCCGAACGCTTC 11673 |||| ||| ||| ||||| ||||| ||| ||||| | || |||| Sbjct 1311 ATTGAGAGTCGATTCTCGCTCGTCGTTTCCTCCCATTTGTCCACCCTTTCCACGAGCTT- 1253 Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733 |||||| ||||||||||||||||||||| ||||| |||| ||| ||| || Sbjct 1252 -TACCGATAGCGTCAATCTCATCGATGAAGACGATCGACGGAGCGTTCTTCTTTGCTTGA 1194 Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCG 11793 |||| || || | || || |||||||||| |||||||||||||| ||||| | || Sbjct 1193 GCGAAGAGATCCCTGACTCGACTCGCTCCAACTCCTACGAACATCTCGACGAATTCTGAT 1134 Query 11794 GCAGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGT 11852 | | | || || | |||||| ||| | || ||||| | || ||||||||||| Sbjct 1133 CCCG-ATACCGACAAGAAGGGTACACCTGCTTCTCCAGCCGTTGCCTTTGCGAGGAGAGT 1075 Query 11853 CTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCC 11912 ||||| |||||||| | ||||| || | ||| || | ||||||||||| || || Sbjct 1074 TTTACCGGTACCAGGAGGACCAGAAAGGATGGCTCCTCTCGGGATCTTGGCTCCCAATCG 1015 Query 11913 AAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGA 11972 ||| | | || ||||||||||| | || | |||| || || ||||| || Sbjct 1014 TTCGTAATGTTTGGGGTTCTTGAGGAACTTGACGAACTCCATAATCTCTTCCTTCGCCTC 955 Query 11973 GTCGATACCCTCAACATC 11990 ||| || || | ||||| Sbjct 954 GTCCATTCCAGCTACATC 937 >seq1608 Length=13696 Score = 93.3 bits (102), Expect = 5e-14 Identities = 121/167 (72%), Gaps = 3/167 (2%) Strand=Plus/Minus Query 119550 AGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAG 119609 ||||| |||||||| || | ||||| ||||| ||||| | | ||| |||||| ||| Sbjct 13548 AGTCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATTGAAGCGAAAGATCCAGAGAAG 13489 Query 119610 AAGATGCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAA---AGGTCGAGACTTG 119666 ||||| ||||| ||| ||||||||||| ||||| || |||| | | | | | Sbjct 13488 AAGATTCCCTCAACAGCGGCGAAAGCGACGAGACGTTCTCCAAAGACTGATTGTTCATCG 13429 Query 119667 TCGAACCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGAC 119713 | || ||||||||| ||||||| |||||| | |||||||| || Sbjct 13428 TTGATCCACTTGAGTGCCCAGTCGGCCTTCTTGGCAATGCAGGGAAC 13382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588954708517600