Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq759 159 4e-34 seq315 87.8 2e-12 >seq759 Length=2593 Score = 159 bits (176), Expect = 4e-34 Identities = 469/717 (65%), Gaps = 17/717 (2%) Strand=Plus/Minus Query 106670 TTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCC---ACC 106726 ||||| ||||| ||| ||||||||| || |||| ||||| || || || || ||| Sbjct 1454 TTGGCGCGTCCTTCCTTCTCGTACTTGTTGAAGAGAGCTTCGAATTCGTCGCCGTAAACC 1395 Query 106727 GCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCA 106786 ||| || || || || || | | || ||||| |||| ||| | |||| ||| || Sbjct 1394 TCGT--GA-AGTCCGGGAGCTTCAGCAGGGCAGAAGAGAGGCCAGTCACCATTCTCTTCG 1338 Query 106787 ACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCC 106846 || ||||||||||| ||||| || ||||| |||| | |||||||| | | ||| | Sbjct 1337 ACACGCTTCATGAAGAGGTCGGGGATCCAAAGGGCGAAGAAGAGATCACGAGCACGAACT 1278 Query 106847 TCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGC 106906 || || | || || || ||| | || ||||| || | || || |||||||| || Sbjct 1277 TCCTCCTTTCCGTGATTCTTTCGGAGGTCGAGGAATTCGAAAATGTCGGCGTGCCACGGT 1218 Query 106907 TCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGC 106960 ||||| |||| ||||| || ||| ||||| || |||||| || || || Sbjct 1217 TCAAGGTAGATTGCGAAAGCTCC---AGGACGCTTGTTTCCTCCTTGATCGACGTAACGA 1161 Query 106961 GCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCC 107020 || ||| ||| | || |||||||| || | ||||| | || | |||||| || || Sbjct 1160 GCAGTGTTGTTGTAAACACGAAGCATAGGGACGATACCGTTCGAGTAACCATTGGTTCCA 1101 Query 107021 CGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCAC 107080 || ||| | | || | | | || || | || || || || || | Sbjct 1100 GCGATGTAAGAACCAGTCGCACGAATGTTGTGAATCGAGAGACCGATTCCTCCTGCAGTC 1041 Query 107081 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 107140 |||||||| | || || | | || || | |||||||| | ||| ||||| ||||| Sbjct 1040 TTTGAGATGAGGGCGCAAGTCTTGAGGGTGTCGTAGATACCTTCGATCGAGTCGTCCTTC 981 Query 107141 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 107200 | | || ||||||||| || | || || || || ||||| ||||||||||| Sbjct 980 ATCGTGACGAGGAAGCAAGAAGAGAGTTGAGGGTGAGGAGTTCCAGCGTTGAAGAGGGTA 921 Query 107201 GGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCA 107260 || | ||||| |||| | || |||||| || ||| || | | | ||| Sbjct 920 GGAGAAGCGTGGGTGAAGTATCGTTCGGACATGAGGTTGTAGGTTTGAAGTGCTCGATCG 861 Query 107261 ATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATG 107320 || || ||||| || || | || |||||||| | ||||| ||| ||| ||| | Sbjct 860 ATATCGCTTCCGTGAATACCAACAGCGACACGCATGAGCATGTGTTGAGGTCGTTCAGCG 801 Query 107321 AGGATGCCATCGAGCCGTTGAAGAT-AGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 | ||||||||| || | || | || | | || || ||||||| ||||||||| Sbjct 800 ACTCTGCCATCGATTCGGAGGAGGTAAGAACGT-TCGAGAGTTTTGAAACCAAAGTA 745 >seq315 Length=7320 Score = 87.8 bits (96), Expect = 2e-12 Identities = 175/255 (69%), Gaps = 6/255 (2%) Strand=Plus/Plus Query 169260 TGGTAGTCTTTTCCTTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTG-GTT 169318 || ||| | || |||||||| | ||||| ||||| |||| | | ||||| | | ||| Sbjct 5621 TGATAGACCTTGCCTTGTTGTAAACCCATGATCTGTTTGATAGC-TTGAATTTCGGCGTT 5679 Query 169319 T--GATGTGAGCTGTGCCACTGAAGCGTCGCGGACATTCTTACACTTCCCACGGAGAGGA 169376 | || |||| | ||| | || || || || || | || ||||| ||||| Sbjct 5680 TTCGAGCAAAGCTTTTCCAGTC--GCTTCTCGAACGTTGAGCAATTTTCCACGAAGAGGG 5737 Query 169377 AAGACGCCATAGTGATCACGTCCAACGACGGAGAGACCCGCGACCGCAAGGGTTTTCGCT 169436 ||||| ||||||| || ||||| || || |||||||| | || || || | |||||| Sbjct 5738 AAGACTCCATAGTTGTCGCGTCCGACAACTGAGAGACCGGATACGGCGAGAGCTTTCGCA 5797 Query 169437 GAATCACCCTCCGTGACAATGAGGGTACACTTTCCAGATTGCGCCGTACCCGCCTTGTTT 169496 || || || || || | ||||||||||| || | | | | ||| || || ||||| Sbjct 5798 GAGTCTCCTTCGGTCAAGATGAGGGTACATTTGCTACCATTCTTCGTTCCTGCATTGTTG 5857 Query 169497 GCGTCGTCCAACTTG 169511 ||||| || | |||| Sbjct 5858 GCGTCTTCGAGCTTG 5872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589959472194080