Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq759 129 7e-25
>seq759
Length=2593
Score = 129 bits (142), Expect = 7e-25
Identities = 382/589 (65%), Gaps = 0/589 (0%)
Strand=Plus/Minus
Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCAT 48270
|||| || | || || |||||||| || | || | ||| | || | | ||| || |
Sbjct 1330 TCATGAAGAGGTCGGGGATCCAAAGGGCGAAGAAGAGATCACGAGCACGAACTTCCTCCT 1271
Query 48271 TGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAAT 48330
| || |||| || || || || || || | || || || ||||| ||||| | |
Sbjct 1270 TTCCGTGATTCTTTCGGAGGTCGAGGAATTCGAAAATGTCGGCGTGCCACGGTTCAAGGT 1211
Query 48331 ATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGT 48390
| ||||| | | || || || || || ||||||||||| | || | ||||| ||||
Sbjct 1210 AGATTGCGAAAGCTCCAGGACGCTTGTTTCCTCCTTGATCGACGTAACGAGCAGTGTTGT 1151
Query 48391 TATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAAC 48450
| ||||| | | ||| ||||| ||||| || || |||||||||||| | || |||
Sbjct 1150 TGTAAACACGAAGCATAGGGACGATACCGTTCGAGTAACCATTGGTTCCAGCGATGTAAG 1091
Query 48451 TTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTA 48510
||| | || | || || ||| || | ||| || || ||||| | || || || |
Sbjct 1090 AACCAGTCGCACGAATGTTGTGAATCGAGAGACCGATTCCTCCTGCAGTCTTTGAGATGA 1031
Query 48511 GAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATA 48570
| || || || ||||| || || || ||||| || || || |||| | | |
Sbjct 1030 GGGCGCAAGTCTTGAGGGTGTCGTAGATACCTTCGATCGAGTCGTCCTTCATCGTGACGA 971
Query 48571 GAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCAT 48630
| || ||| ||| | ||| || ||| |||||| | || || | || ||||| || |
Sbjct 970 GGAAGCAAGAAGAGAGTTGAGGGTGAGGAGTTCCAGCGTTGAAGAGGGTAGGAGAAGCGT 911
Query 48631 GAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATT 48690
| | || || || || | | || || |||| || | ||| ||||| | |
Sbjct 910 GGGTGAAGTATCGTTCGGACATGAGGTTGTAGGTTTGAAGTGCTCGATCGATATCGCTTC 851
Query 48691 GATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTAT 48750
|| ||||| | || |||||||| | ||| | |||||||| |||| | | | || ||
Sbjct 850 CGTGAATACCAACAGCGACACGCATGAGCATGTGTTGAGGTCGTTCAGCGACTCTGCCAT 791
Query 48751 TTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTT 48799
||| | || || || ||| | ||||| |||||||| |||||
Sbjct 790 CGATTCGGAGGAGGTAAGAACGTTCGAGAGTTTTGAAACCAAAGTAGTT 742
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562088479766880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |