Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1608 102 2e-16 >seq1608 Length=13696 Score = 102 bits (112), Expect = 2e-16 Identities = 122/163 (75%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 48178 GGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGA 48237 ||||||| ||| || ||||||| || | || ||||||||||| |||| |||||||| Sbjct 13558 GGAGAAGGTGAGTCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATTGAAGCGAAAGA 13499 Query 48238 GCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGC 48297 |||||||||||||| ||||| || || ||||| ||| ||| | ||||| ||||| Sbjct 13498 TCCAGAGAAGAAGATTCCCTCAACAGCGGCGAAAGCGACGAGACGTTCTCC-AAAGACTG 13440 Query 48298 GTTCTT-GTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTT 48339 || || || |||||| || |||||||| |||||||| Sbjct 13439 ATTGTTCATCGTTGATCCACTTGAGTGCCCAGTCGGCCTTCTT 13397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931499125089280