Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq759 113 8e-20 >seq759 Length=2593 Score = 113 bits (124), Expect = 8e-20 Identities = 428/663 (65%), Gaps = 13/663 (2%) Strand=Plus/Minus Query 221811 ACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCA 221870 |||| | |||||||| |||||||| ||||| || || ||||| || | ||||| Sbjct 1555 ACTTACTGTTGGCAGCATCCTTGTACAGCATGAAAGGGTTACCAGTTTCGACTTGAGCTT 1496 Query 221871 CCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCT 221930 | || || || ||| || | | ||| || |||| ||||| | || || || Sbjct 1495 CGAGGATTGCGTACCAAAGCTTTTGAGCGGGCATCGTCTTCTTGGCGCGTCCTTC---CT 1439 Query 221931 TTTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGAC 221990 | || ||| | | |||| || || | || ||||| |||||| || || ||| Sbjct 1438 TCTCGTACTTGTTGAAGAGAGCTTCGAATTCGTCGCCGTAAACCTCGTGAAGTCCGGGAG 1379 Query 221991 ACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGT 222050 || || || | ||| ||||| || |||| ||| | || ||||||||||| Sbjct 1378 CTTCAGCAGGGCAGAAGAGAGGCCAGTCACCATTCTCTTCGACACGCTTCATGAAGAGGT 1319 Query 222051 CCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTT 222110 | |||||||| || || |||||||| | | || |||||| |||| || | Sbjct 1318 CGGGGATCCAAAGGGCGAAGAAGAGATCACGAGCACGAACTTCCTCCTTTCCGTGATTCT 1259 Query 222111 TCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAG 222170 | | || || | || || |||||||| ||||||||||| || || |||| || | || Sbjct 1258 TTCGGAGGTCGAGGAATTCGAAAATGTCGGCGTGCCACGGTTCAAGGTAGATTGCGAAAG 1199 Query 222171 CGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGA 222229 | || || |||||||| || || ||||| | | | ||| | |||| | | ||| Sbjct 1198 CTCCAGGACGCTTGTTTCCTCCTTGATCGA-CGTAACGAGCAGTGTTGTTGTAAACACGA 1140 Query 222230 AGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCC 222289 || | || || | ||||| || ||| ||||| || ||||| | ||| || Sbjct 1139 AGCATAGGGACGATACCGTTCGAGTAACCATTGGTTCCAGCGATGTAAGAACCAGTCGCA 1080 Query 222290 CTCAGGTT---ACTGGCAGACATGCCGATACCACCGGC-GTGTTTCGAGATCATGGCGCA 222345 | | ||| | | | ||| | ||||| || || || || ||| ||||| | |||||| Sbjct 1079 CGAATGTTGTGAATCG-AGAGA--CCGATTCCTCCTGCAGTCTTT-GAGATGAGGGCGCA 1024 Query 222346 GCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACA 222405 ||||||| ||||| ||| || || || ||||| ||||| | | | || || || Sbjct 1023 AGTCTTGAGGGTGTCGTAGATACCTTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCA 964 Query 222406 AGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAA 222465 ||| || | |||| | | | | ||||| || || || ||| ||||| || || Sbjct 963 AGAAGAGAGTTGAGGGTGAGGAGTTCCAGCGTTGAAGAGGGTAGGAGAAGCGTGGGTGAA 904 Query 222466 GTA 222468 ||| Sbjct 903 GTA 901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928811222260480