Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq759 113 8e-20
>seq759
Length=2593
Score = 113 bits (124), Expect = 8e-20
Identities = 428/663 (65%), Gaps = 13/663 (2%)
Strand=Plus/Minus
Query 221811 ACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCA 221870
|||| | |||||||| |||||||| ||||| || || ||||| || | |||||
Sbjct 1555 ACTTACTGTTGGCAGCATCCTTGTACAGCATGAAAGGGTTACCAGTTTCGACTTGAGCTT 1496
Query 221871 CCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCT 221930
| || || || ||| || | | ||| || |||| ||||| | || || ||
Sbjct 1495 CGAGGATTGCGTACCAAAGCTTTTGAGCGGGCATCGTCTTCTTGGCGCGTCCTTC---CT 1439
Query 221931 TTTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGAC 221990
| || ||| | | |||| || || | || ||||| |||||| || || |||
Sbjct 1438 TCTCGTACTTGTTGAAGAGAGCTTCGAATTCGTCGCCGTAAACCTCGTGAAGTCCGGGAG 1379
Query 221991 ACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGT 222050
|| || || | ||| ||||| || |||| ||| | || |||||||||||
Sbjct 1378 CTTCAGCAGGGCAGAAGAGAGGCCAGTCACCATTCTCTTCGACACGCTTCATGAAGAGGT 1319
Query 222051 CCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTT 222110
| |||||||| || || |||||||| | | || |||||| |||| || |
Sbjct 1318 CGGGGATCCAAAGGGCGAAGAAGAGATCACGAGCACGAACTTCCTCCTTTCCGTGATTCT 1259
Query 222111 TCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAG 222170
| | || || | || || |||||||| ||||||||||| || || |||| || | ||
Sbjct 1258 TTCGGAGGTCGAGGAATTCGAAAATGTCGGCGTGCCACGGTTCAAGGTAGATTGCGAAAG 1199
Query 222171 CGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGA 222229
| || || |||||||| || || ||||| | | | ||| | |||| | | |||
Sbjct 1198 CTCCAGGACGCTTGTTTCCTCCTTGATCGA-CGTAACGAGCAGTGTTGTTGTAAACACGA 1140
Query 222230 AGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCC 222289
|| | || || | ||||| || ||| ||||| || ||||| | ||| ||
Sbjct 1139 AGCATAGGGACGATACCGTTCGAGTAACCATTGGTTCCAGCGATGTAAGAACCAGTCGCA 1080
Query 222290 CTCAGGTT---ACTGGCAGACATGCCGATACCACCGGC-GTGTTTCGAGATCATGGCGCA 222345
| | ||| | | | ||| | ||||| || || || || ||| ||||| | ||||||
Sbjct 1079 CGAATGTTGTGAATCG-AGAGA--CCGATTCCTCCTGCAGTCTTT-GAGATGAGGGCGCA 1024
Query 222346 GCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACA 222405
||||||| ||||| ||| || || || ||||| ||||| | | | || || ||
Sbjct 1023 AGTCTTGAGGGTGTCGTAGATACCTTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCA 964
Query 222406 AGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAA 222465
||| || | |||| | | | | ||||| || || || ||| ||||| || ||
Sbjct 963 AGAAGAGAGTTGAGGGTGAGGAGTTCCAGCGTTGAAGAGGGTAGGAGAAGCGTGGGTGAA 904
Query 222466 GTA 222468
|||
Sbjct 903 GTA 901
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928811222260480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |