Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq1827 208 1e-48
>seq1827
Length=8425
Score = 208 bits (230), Expect = 1e-48
Identities = 262/360 (73%), Gaps = 0/360 (0%)
Strand=Plus/Minus
Query 47787 TCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTC 47846
||| ||||| | ||| |||||||| || || |||||||||||||| ||||||| ||||
Sbjct 2425 TCCAGTGGCGAGAACGAAATCATCGGGCTCGTCTTGTTGAAGCATACGCCACATACCCTC 2366
Query 47847 GACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACA 47906
||| || || | ||| |||||||| ||||| || || | || || || || | ||
Sbjct 2365 GACGTAGTCACGGGCGTGTCCCCAATCACGCTTGGCGTCCAAGTTACCGAGGTAGAGGCA 2306
Query 47907 GTCTTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGT 47966
||||| | || |||||| | | || | | ||||| || || || |||||
Sbjct 2305 CTCTTGTTGCCCGAGCGAGATTTCGGCGACAGCACGAGAGATCTTTCGGGTGACGAAAGT 2246
Query 47967 TTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTA 48026
| ||||||| |||||||| || || || || ||||| | ||| |||||||||||
Sbjct 2245 TCGTCCACGTCGAGGAGATTCGTGGTTGAAGAGGATACCGTTGGCGGCGTACATTCCGTA 2186
Query 48027 TGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGA 48086
|||||||| |||||||| || |||||| | | |||||||| || ||||| ||||| ||
Sbjct 2185 GGATTCACGGTAGTTCTTGACGATCCAGAAAGCGTAGAGTTTCGCTACACCGTAAGGGGA 2126
Query 48087 ACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTC 48146
||| || ||||| || || ||||| | || ||||| || |||||| || ||||||||
Sbjct 2125 ACGAGGGTAGAAGGGAGTAGTCTCGGATTGAGGAGTTTCAACCACCTTTCCGTAAAGTTC 2066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665470342377440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |