Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq1827 208 1e-48 >seq1827 Length=8425 Score = 208 bits (230), Expect = 1e-48 Identities = 262/360 (73%), Gaps = 0/360 (0%) Strand=Plus/Minus Query 47787 TCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTC 47846 ||| ||||| | ||| |||||||| || || |||||||||||||| ||||||| |||| Sbjct 2425 TCCAGTGGCGAGAACGAAATCATCGGGCTCGTCTTGTTGAAGCATACGCCACATACCCTC 2366 Query 47847 GACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACA 47906 ||| || || | ||| |||||||| ||||| || || | || || || || | || Sbjct 2365 GACGTAGTCACGGGCGTGTCCCCAATCACGCTTGGCGTCCAAGTTACCGAGGTAGAGGCA 2306 Query 47907 GTCTTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGT 47966 ||||| | || |||||| | | || | | ||||| || || || ||||| Sbjct 2305 CTCTTGTTGCCCGAGCGAGATTTCGGCGACAGCACGAGAGATCTTTCGGGTGACGAAAGT 2246 Query 47967 TTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTA 48026 | ||||||| |||||||| || || || || ||||| | ||| ||||||||||| Sbjct 2245 TCGTCCACGTCGAGGAGATTCGTGGTTGAAGAGGATACCGTTGGCGGCGTACATTCCGTA 2186 Query 48027 TGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGA 48086 |||||||| |||||||| || |||||| | | |||||||| || ||||| ||||| || Sbjct 2185 GGATTCACGGTAGTTCTTGACGATCCAGAAAGCGTAGAGTTTCGCTACACCGTAAGGGGA 2126 Query 48087 ACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTC 48146 ||| || ||||| || || ||||| | || ||||| || |||||| || |||||||| Sbjct 2125 ACGAGGGTAGAAGGGAGTAGTCTCGGATTGAGGAGTTTCAACCACCTTTCCGTAAAGTTC 2066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665470342377440