Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1827 154 2e-32 seq759 138 1e-27 >seq1827 Length=8425 Score = 154 bits (170), Expect = 2e-32 Identities = 268/387 (69%), Gaps = 2/387 (1%) Strand=Plus/Minus Query 177574 ACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCTTCTTGTTGAAGCATG 177633 |||| ||| ||||| || || |||| ||| | ||||| | ||| |||||||||||||| Sbjct 2439 ACAGGGTGGGTCTCTCCAGTGGCGAGAACGAAATCATCGGGCTCGTCTTGTTGAAGCATA 2380 Query 177634 AGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTGGCAGCGTTGAGGTTA 177693 ||||||| | || || ||||| ||| || ||||| || | |||| | |||| Sbjct 2379 CGCCACATACCCTCGACGTAGTCACGGGCGTGTCCCCAATCACGCTTGGCGTCCAAGTTA 2320 Query 177694 CCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACGCCATCAGTAATCTTC 177753 ||||| | ||| ||||| | || | |||| ||| || || ||||| Sbjct 2319 CCGAGGTAGAGGCACTCTTGTTGCCCGAGCGAGATTTCGGCGACAGCACGAGAGATCTTT 2260 Query 177754 TTTGTGAC-AAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCGGAGCA 177812 ||||| ||||| | || |||| || |||||||||||||||||||| ||| | Sbjct 2259 CGGGTGACGAAAGTTCGT-CCACGTCGAGGAGATTCGTGGTTGAAGAGGATACCGTTGGC 2201 Query 177813 GGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAATTTGGA 177872 ||| ||||| || |||||||| ||||| || ||||||| |||| |||| | ||| | Sbjct 2200 GGCGTACATTCCGTAGGATTCACGGTAGTTCTTGACGATCCAGAAAGCGTAGAGTTTCGC 2141 Query 177873 GACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCTCGGAC 177932 || || || ||| || ||||||||||| || ||| | ||| |||||||| || Sbjct 2140 TACACCGTAAGGGGAACGAGGGTAGAAGGGAGTAGTCTCGGATTGAGGAGTTTCAACCAC 2081 Query 177933 TTTACCAAACATCTCCGAAGTTGAGGC 177959 || || | | |||||||| ||||| Sbjct 2080 CTTTCCGTAAAGTTCCGAAGTAGAGGC 2054 >seq759 Length=2593 Score = 138 bits (152), Expect = 1e-27 Identities = 517/805 (64%), Gaps = 17/805 (2%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCT-ATCTTCAACGGCTCGATGGCATCCTCAT 75204 ||||||||| ||||||| || || | | || | || | || ||||||||| || Sbjct 745 TACTTTGGTTTCAAAACTCTCGA-ACGTTCTTACCTCCTCCGAATCGATGGCAGAGTCGC 803 Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264 ||| || || ||||| ||||||| ||||| | || || ||||| || || || Sbjct 804 TGAACGACCTCAACACATGCTCATGCGTGTCGCTGTTGGTATTCACGGAAGCGATATCGA 863 Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAAC 75324 | | | | || ||| || |||||| || | |||| ||||| | || || Sbjct 864 TCGAGCACTTCAAACCTACAACCTCATGTCCGAACGATACTTCACCCACGCTTCTCCTAC 923 Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384 ||||||||| ||||| || || || || | || ||||||||| || | | || Sbjct 924 CCTCTTCAACGCTGGAACTCCTCACCCTCAACTCTCTTCTTGCTTCCTCGTCACGATGAA 983 Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444 ||| ||||| ||| | |||||||| | || || | | || || | ||||||||| Sbjct 984 GGACGACTCGATCGAAGGTATCTACGACACCCTCAAGACTTGCGCCCTCATCTCAAAGAC 1043 Query 75445 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 75504 || || || || || | || || | | | || | | ||| || || Sbjct 1044 TGCAGGAGGAATCGGTCTCTCGATTCACAACATTCGTGCGACTGGTTCTTACATCGCTGG 1103 Query 75505 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564 || |||||| | || | ||||| | || |||||||| || | ||| ||| || || Sbjct 1104 AACCAATGGTTACTCGAACGGTATCGTCCCTATGCTTCGTGTTTACAACAACACTGCTCG 1163 Query 75565 CTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACC 75618 || || |||||| || ||||| || | |||| ||||| | ||||| Sbjct 1164 TTACGTCGATCAAGGAGGAAACAAGCGTCCT---GGAGCTTTCGCAATCTACCTTGAACC 1220 Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678 ||||| ||||| || | || ||||| || | ||| || || || | || || | Sbjct 1221 GTGGCACGCCGACATTTTCGAATTCCTCGACCTCCGAAAGAATCACGGAAAGGAGGAAGT 1280 Query 75679 TCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 ||| | | |||||||| | |||| ||||| || ||||| ||||||||||| || || Sbjct 1281 TCGTGCTCGTGATCTCTTCTTCGCCCTTTGGATCCCCGACCTCTTCATGAAGCGTGTCGA 1340 Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT 75798 ||| |||| | ||| |||| ||||| || | | || || || || || ||| ||| Sbjct 1341 AGAGAATGGTGACTGGCCTCTCTTCTGCCCTGCTGAAGCTCCCGGACT-TC--ACGAGGT 1397 Query 75799 ---GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGC 75855 || || || || ||||| |||| || ||||| || |||| || | ||||| Sbjct 1398 TTACGGCGACGAATTCGAAGCTCTCTTCAACAAGTACGAGAAGGAAGGACGCGCCAAGAA 1457 Query 75856 GACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 ||| | || || | ||||| | || || ||| || | || || ||||| | Sbjct 1458 GACGATGCCCGCTCAAAAGCTTTGGTACGCAATCCTCGAAGCTCAAGTCGAAACTGGTAA 1517 Query 75916 ACCATATATGCTTTACAAGGATGCT 75940 || | ||||| |||||||||||| Sbjct 1518 CCCTTTCATGCTGTACAAGGATGCT 1542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596548034008960