Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1827 154 2e-32
seq759 138 1e-27
>seq1827
Length=8425
Score = 154 bits (170), Expect = 2e-32
Identities = 268/387 (69%), Gaps = 2/387 (1%)
Strand=Plus/Minus
Query 177574 ACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCTTCTTGTTGAAGCATG 177633
|||| ||| ||||| || || |||| ||| | ||||| | ||| ||||||||||||||
Sbjct 2439 ACAGGGTGGGTCTCTCCAGTGGCGAGAACGAAATCATCGGGCTCGTCTTGTTGAAGCATA 2380
Query 177634 AGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTGGCAGCGTTGAGGTTA 177693
||||||| | || || ||||| ||| || ||||| || | |||| | ||||
Sbjct 2379 CGCCACATACCCTCGACGTAGTCACGGGCGTGTCCCCAATCACGCTTGGCGTCCAAGTTA 2320
Query 177694 CCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACGCCATCAGTAATCTTC 177753
||||| | ||| ||||| | || | |||| ||| || || |||||
Sbjct 2319 CCGAGGTAGAGGCACTCTTGTTGCCCGAGCGAGATTTCGGCGACAGCACGAGAGATCTTT 2260
Query 177754 TTTGTGAC-AAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCGGAGCA 177812
||||| ||||| | || |||| || |||||||||||||||||||| ||| |
Sbjct 2259 CGGGTGACGAAAGTTCGT-CCACGTCGAGGAGATTCGTGGTTGAAGAGGATACCGTTGGC 2201
Query 177813 GGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAATTTGGA 177872
||| ||||| || |||||||| ||||| || ||||||| |||| |||| | ||| |
Sbjct 2200 GGCGTACATTCCGTAGGATTCACGGTAGTTCTTGACGATCCAGAAAGCGTAGAGTTTCGC 2141
Query 177873 GACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCTCGGAC 177932
|| || || ||| || ||||||||||| || ||| | ||| |||||||| ||
Sbjct 2140 TACACCGTAAGGGGAACGAGGGTAGAAGGGAGTAGTCTCGGATTGAGGAGTTTCAACCAC 2081
Query 177933 TTTACCAAACATCTCCGAAGTTGAGGC 177959
|| || | | |||||||| |||||
Sbjct 2080 CTTTCCGTAAAGTTCCGAAGTAGAGGC 2054
>seq759
Length=2593
Score = 138 bits (152), Expect = 1e-27
Identities = 517/805 (64%), Gaps = 17/805 (2%)
Strand=Plus/Plus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCT-ATCTTCAACGGCTCGATGGCATCCTCAT 75204
||||||||| ||||||| || || | | || | || | || ||||||||| ||
Sbjct 745 TACTTTGGTTTCAAAACTCTCGA-ACGTTCTTACCTCCTCCGAATCGATGGCAGAGTCGC 803
Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264
||| || || ||||| ||||||| ||||| | || || ||||| || || ||
Sbjct 804 TGAACGACCTCAACACATGCTCATGCGTGTCGCTGTTGGTATTCACGGAAGCGATATCGA 863
Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAAC 75324
| | | | || ||| || |||||| || | |||| ||||| | || ||
Sbjct 864 TCGAGCACTTCAAACCTACAACCTCATGTCCGAACGATACTTCACCCACGCTTCTCCTAC 923
Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384
||||||||| ||||| || || || || | || ||||||||| || | | ||
Sbjct 924 CCTCTTCAACGCTGGAACTCCTCACCCTCAACTCTCTTCTTGCTTCCTCGTCACGATGAA 983
Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444
||| ||||| ||| | |||||||| | || || | | || || | |||||||||
Sbjct 984 GGACGACTCGATCGAAGGTATCTACGACACCCTCAAGACTTGCGCCCTCATCTCAAAGAC 1043
Query 75445 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 75504
|| || || || || | || || | | | || | | ||| || ||
Sbjct 1044 TGCAGGAGGAATCGGTCTCTCGATTCACAACATTCGTGCGACTGGTTCTTACATCGCTGG 1103
Query 75505 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564
|| |||||| | || | ||||| | || |||||||| || | ||| ||| || ||
Sbjct 1104 AACCAATGGTTACTCGAACGGTATCGTCCCTATGCTTCGTGTTTACAACAACACTGCTCG 1163
Query 75565 CTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACC 75618
|| || |||||| || ||||| || | |||| ||||| | |||||
Sbjct 1164 TTACGTCGATCAAGGAGGAAACAAGCGTCCT---GGAGCTTTCGCAATCTACCTTGAACC 1220
Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678
||||| ||||| || | || ||||| || | ||| || || || | || || |
Sbjct 1221 GTGGCACGCCGACATTTTCGAATTCCTCGACCTCCGAAAGAATCACGGAAAGGAGGAAGT 1280
Query 75679 TCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738
||| | | |||||||| | |||| ||||| || ||||| ||||||||||| || ||
Sbjct 1281 TCGTGCTCGTGATCTCTTCTTCGCCCTTTGGATCCCCGACCTCTTCATGAAGCGTGTCGA 1340
Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT 75798
||| |||| | ||| |||| ||||| || | | || || || || || ||| |||
Sbjct 1341 AGAGAATGGTGACTGGCCTCTCTTCTGCCCTGCTGAAGCTCCCGGACT-TC--ACGAGGT 1397
Query 75799 ---GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGC 75855
|| || || || ||||| |||| || ||||| || |||| || | |||||
Sbjct 1398 TTACGGCGACGAATTCGAAGCTCTCTTCAACAAGTACGAGAAGGAAGGACGCGCCAAGAA 1457
Query 75856 GACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915
||| | || || | ||||| | || || ||| || | || || ||||| |
Sbjct 1458 GACGATGCCCGCTCAAAAGCTTTGGTACGCAATCCTCGAAGCTCAAGTCGAAACTGGTAA 1517
Query 75916 ACCATATATGCTTTACAAGGATGCT 75940
|| | ||||| ||||||||||||
Sbjct 1518 CCCTTTCATGCTGTACAAGGATGCT 1542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596548034008960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |