Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq759 134 2e-25 seq1608 98.7 1e-14 >seq759 Length=2593 Score = 134 bits (148), Expect = 2e-25 Identities = 184/257 (72%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 || |||||||| || || |||| ||| | || || ||||| || |||| ||||| || Sbjct 1175 TGATCGACGTAACGAGCAGTGTTGTTGTAAACACGAAGCATAGGGACGATACCGTTCGAG 1116 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 | || ||||| || || | ||| | || | || || | ||||| | | ||| Sbjct 1115 TAACCATTGGTTCCAGCGATGTAAGAACCAGTCGCACGAATGTTGTGAATCGAGAGACCG 1056 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 || || || || | ||| |||||||| ||||| ||||| ||||||||||| || ||| Sbjct 1055 ATTCCTCCTGCAGTCTTTGAGATGAGGGCGCAAGTCTTGAGGGTGTCGTAGATACCTTCG 996 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 ||||||||| ||||||| ||||| ||||| || ||| ||| ||||| | || || Sbjct 995 ATCGAGTCGTCCTTCATCGTGACGAGGAAGCAAGAAGAGAGTTGAGGGTGAGGAGTTCCA 936 Query 1630306 GCGTTGAAGAGCGTGGG 1630322 ||||||||||| || || Sbjct 935 GCGTTGAAGAGGGTAGG 919 Score = 107 bits (118), Expect = 2e-17 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 1628372 CGCCGTAGCACTCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCAC 1628431 ||||||| |||||| || ||||| || || | || || ||||| | |||||| ||| Sbjct 1405 CGCCGTAAACCTCGTGAAGTCCGGGAGCTTCAGCAGGGCAGAAGAGAGGCCAGTCACCAT 1346 Query 1628432 CGGTCACCG-CGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGC 1628490 || || | || ||| |||||||| |||| || ||| | ||||| || || Sbjct 1345 TC-TCTTCGACACGCTTCATGAAGAGGTCGGGGATCCAAAGGGCGAAGAAGAGATCACGA 1287 Query 1628491 GCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCG 1628550 || || |||||||| ||||| |||||| ||||||||| | |||| |||||||||| Sbjct 1286 GCACGAACTTCCTCCTTTCCGTGATTCTTTCGGAGGTCGAGGAATTCGAAAATGTCGGCG 1227 Query 1628551 TGCCACGGCTCCAGGTAG 1628568 |||||||| || |||||| Sbjct 1226 TGCCACGGTTCAAGGTAG 1209 >seq1608 Length=13696 Score = 98.7 bits (108), Expect = 1e-14 Identities = 121/163 (74%), Gaps = 7/163 (4%) Strand=Plus/Minus Query 869210 AAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCC 869269 |||| ||| ||||||||||| || |||||||||||||| ||||| | |||| || Sbjct 13554 AAGGTGAGTCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATTGAAGCGAAAGATCCA 13495 Query 869270 GAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAG-GTG-TCGA 869327 ||||| ||||| ||||| || ||||| || ||| ||| || || ||||| || | | Sbjct 13494 GAGAAGAAGATTCCCTCAACAGCGGCGAAAGCGACGAGACGTTCTCCAAAGACTGATTG- 13436 Query 869328 GGCCCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTT 869370 || | |||||||||||| | |||||||||||||| || Sbjct 13435 ----TTCATCGTTGATCCACTTGAGTGCCCAGTCGGCCTTCTT 13397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106901868936764