Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq759 140 8e-28
>seq759
Length=2593
Score = 140 bits (154), Expect = 8e-28
Identities = 525/809 (65%), Gaps = 27/809 (3%)
Strand=Plus/Plus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGC-GAGATC 110360
|||| ||||||||||||||||| |||||| |||| | || || || ||||| ||| ||
Sbjct 743 ACTACTTTGGTTTCAAAACTCTCGAACGTTCTTACCTCCTCCGAATCGATGGCAGAG-TC 801
Query 110361 ATTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATT 110420
|||||| |||||||||||| | | ||||| || |||||||||| ||| |||||
Sbjct 802 GCTGAACGACCTCAACACATGCTCATGCGTGTCGCTGTTGGTATTCACGGAAGCGATATC 861
Query 110421 AAAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT--ATTCATGCTACTC 110478
| | || || || | | | || || | || | || ||| |||
Sbjct 862 GATCGAGCACTTCAAACCTACAA--CCTCATGTCCGAACGATACTTCACCCACGCTTCTC 919
Query 110479 CTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAA 110538
||||||| || ||||| |||||| | ||| | |||||||||| || | |
Sbjct 920 CTACCCTCTTCAACGCTGGAACTCCTCACCCTCAACTCTCTTCTTGCTTCCTCGTCACGA 979
Query 110539 TTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACT---GCTCTTATTT 110595
| || || || || || |||||||| || || | || | | ||| || || || |
Sbjct 980 TGAAGGACGACTCGATCGAAGGTATCTACGACACCCTCA---AGACTTGCGCCCTCATCT 1036
Query 110596 CTAAAAACT-CTGGAGGAATTGGTATTCACG-TTCATGATATTCGCTCAAAAGGAGCAAA 110653
| ||| ||| | |||||||| ||| || || |||| | ||||| | | || | |
Sbjct 1037 C-AAAGACTGCAGGAGGAATCGGT-CTCTCGATTCACAACATTCGTGCGACTGGTTCTTA 1094
Query 110654 TATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGA 110713
||||| | | || ||| || | || | || || ||| | | || | |||| |
Sbjct 1095 CATCGCTGGAACCAATGGTTACTCGAACGGTATCGTCCCTATGCTTCGTGTTTACAACAA 1154
Query 110714 CACTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCT 110770
|||||| || || ||||||| || ||| | ||| | || || ||||| ||
Sbjct 1155 CACTGCTCGTTACGTCGATCAAGGAGGAAACAAGCGTCCTGGAGCTTTCGCAATCTACCT 1214
Query 110771 CGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGA 110830
||||| ||||| | || || || |||||| | || || || || ||||| ||| ||
Sbjct 1215 TGAACCGTGGCACGCCGACATTTTCGAATTCCTCGACCTCCGAAAGAATCACGGAAAGGA 1274
Query 110831 AGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACG 110890
||| | || |||||| | || | || | ||||| | || | |||||||| ||
Sbjct 1275 GGAAGTTCGTGCTCGTGATCTCTTCTTCGCCCTTTGGATCCCCGACCTCTTCATGAAGCG 1334
Query 110891 TGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGA 110950
||| |||| ||||| ||| |||| | || ||| | |||| || || ||
Sbjct 1335 TGTCGAAGAGAATGGTGACTGGCCTCTCTTCTGCCCTGCTGAAGCTCCCGGACTTCACGA 1394
Query 110951 TGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCG 111010
|| || || | || || |||| || | | | || || || || ||||| | | ||
Sbjct 1395 GGTTTACGGCGACGAATTCGAAGCTCTCTTCAACAAGTACGAGAAGGAAGG-ACG---CG 1450
Query 111011 CAAACAA----ATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAA 111066
| || || || || |||||| | ||||||| | |||||| ||| | ||||| ||||
Sbjct 1451 CCAAGAAGACGATGCCCGCTCAAAAGCTTTGGTACGCAATCCTCGAAGCTCAAGTCGAAA 1510
Query 111067 CTGGAACTCCTTATATTTTGTATAAAGAT 111095
|||| | |||| || |||| || |||
Sbjct 1511 CTGGTAACCCTTTCATGCTGTACAAGGAT 1539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186768824135212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |