Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq759 140 8e-28 >seq759 Length=2593 Score = 140 bits (154), Expect = 8e-28 Identities = 525/809 (65%), Gaps = 27/809 (3%) Strand=Plus/Plus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGC-GAGATC 110360 |||| ||||||||||||||||| |||||| |||| | || || || ||||| ||| || Sbjct 743 ACTACTTTGGTTTCAAAACTCTCGAACGTTCTTACCTCCTCCGAATCGATGGCAGAG-TC 801 Query 110361 ATTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATT 110420 |||||| |||||||||||| | | ||||| || |||||||||| ||| ||||| Sbjct 802 GCTGAACGACCTCAACACATGCTCATGCGTGTCGCTGTTGGTATTCACGGAAGCGATATC 861 Query 110421 AAAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT--ATTCATGCTACTC 110478 | | || || || | | | || || | || | || ||| ||| Sbjct 862 GATCGAGCACTTCAAACCTACAA--CCTCATGTCCGAACGATACTTCACCCACGCTTCTC 919 Query 110479 CTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAA 110538 ||||||| || ||||| |||||| | ||| | |||||||||| || | | Sbjct 920 CTACCCTCTTCAACGCTGGAACTCCTCACCCTCAACTCTCTTCTTGCTTCCTCGTCACGA 979 Query 110539 TTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACT---GCTCTTATTT 110595 | || || || || || |||||||| || || | || | | ||| || || || | Sbjct 980 TGAAGGACGACTCGATCGAAGGTATCTACGACACCCTCA---AGACTTGCGCCCTCATCT 1036 Query 110596 CTAAAAACT-CTGGAGGAATTGGTATTCACG-TTCATGATATTCGCTCAAAAGGAGCAAA 110653 | ||| ||| | |||||||| ||| || || |||| | ||||| | | || | | Sbjct 1037 C-AAAGACTGCAGGAGGAATCGGT-CTCTCGATTCACAACATTCGTGCGACTGGTTCTTA 1094 Query 110654 TATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGA 110713 ||||| | | || ||| || | || | || || ||| | | || | |||| | Sbjct 1095 CATCGCTGGAACCAATGGTTACTCGAACGGTATCGTCCCTATGCTTCGTGTTTACAACAA 1154 Query 110714 CACTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCT 110770 |||||| || || ||||||| || ||| | ||| | || || ||||| || Sbjct 1155 CACTGCTCGTTACGTCGATCAAGGAGGAAACAAGCGTCCTGGAGCTTTCGCAATCTACCT 1214 Query 110771 CGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGA 110830 ||||| ||||| | || || || |||||| | || || || || ||||| ||| || Sbjct 1215 TGAACCGTGGCACGCCGACATTTTCGAATTCCTCGACCTCCGAAAGAATCACGGAAAGGA 1274 Query 110831 AGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACG 110890 ||| | || |||||| | || | || | ||||| | || | |||||||| || Sbjct 1275 GGAAGTTCGTGCTCGTGATCTCTTCTTCGCCCTTTGGATCCCCGACCTCTTCATGAAGCG 1334 Query 110891 TGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGA 110950 ||| |||| ||||| ||| |||| | || ||| | |||| || || || Sbjct 1335 TGTCGAAGAGAATGGTGACTGGCCTCTCTTCTGCCCTGCTGAAGCTCCCGGACTTCACGA 1394 Query 110951 TGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCG 111010 || || || | || || |||| || | | | || || || || ||||| | | || Sbjct 1395 GGTTTACGGCGACGAATTCGAAGCTCTCTTCAACAAGTACGAGAAGGAAGG-ACG---CG 1450 Query 111011 CAAACAA----ATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAA 111066 | || || || || |||||| | ||||||| | |||||| ||| | ||||| |||| Sbjct 1451 CCAAGAAGACGATGCCCGCTCAAAAGCTTTGGTACGCAATCCTCGAAGCTCAAGTCGAAA 1510 Query 111067 CTGGAACTCCTTATATTTTGTATAAAGAT 111095 |||| | |||| || |||| || ||| Sbjct 1511 CTGGTAACCCTTTCATGCTGTACAAGGAT 1539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186768824135212