Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq759 221 2e-52
seq1608 107 3e-18
seq174 91.5 2e-13
>seq759
Length=2593
Score = 221 bits (244), Expect = 2e-52
Identities = 454/675 (67%), Gaps = 0/675 (0%)
Strand=Plus/Minus
Query 69516 TTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGA 69575
||||||||| || || |||| || | | ||| ||| |||| || || | | |
Sbjct 1416 TTCGAATTCGTCGCCGTAAACCTCGTGAAGTCCGGGAGCTTCAGCAGGGCAGAAGAGAGG 1357
Query 69576 CCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAA 69635
||| || ||| || | || || ||||| || || ||||| |||||||| || | ||
Sbjct 1356 CCAGTCACCATTCTCTTCGACACGCTTCATGAAGAGGTCGGGGATCCAAAGGGCGAAGAA 1297
Query 69636 GAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCAT 69695
|||||| | | | | ||| || ||||| ||| ||| || ||||| || || |
Sbjct 1296 GAGATCACGAGCACGAACTTCCTCCTTTCCGTGATTCTTTCGGAGGTCGAGGAATTCGAA 1237
Query 69696 AATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCC 69755
||| || | ||||| ||||| || || || || | |||| || || || ||||||||
Sbjct 1236 AATGTCGGCGTGCCACGGTTCAAGGTAGATTGCGAAAGCTCCAGGACGCTTGTTTCCTCC 1177
Query 69756 CTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGA 69815
||||| | ||| | |||||||| || || || | ||||| || | ||||| || ||
Sbjct 1176 TTGATCGACGTAACGAGCAGTGTTGTTGTAAACACGAAGCATAGGGACGATACCGTTCGA 1117
Query 69816 TTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACC 69875
| |||||| ||||||| || ||| || | || ||||| || ||| || |||||
Sbjct 1116 GTAACCATTGGTTCCAGCGATGTAAGAACCAGTCGCACGAATGTTGTGAATCGAGAGACC 1057
Query 69876 TATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTC 69935
||||||||||| | || ||||| || || ||| || | ||||| || ||||| ||
Sbjct 1056 GATTCCTCCTGCAGTCTTTGAGATGAGGGCGCAAGTCTTGAGGGTGTCGTAGATACCTTC 997
Query 69936 TATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCC 69995
|| || || |||| | | || || || ||| | |||| | || ||||||
Sbjct 996 GATCGAGTCGTCCTTCATCGTGACGAGGAAGCAAGAAGAGAGTTGAGGGTGAGGAGTTCC 937
Query 69996 CGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGT 70055
|| || || | |||||||| ||||| ||||| || ||| || | || ||||| ||
Sbjct 936 AGCGTTGAAGAGGGTAGGAGAAGCGTGGGTGAAGTATCGTTCGGACATGAGGTTGTAGGT 877
Query 70056 TTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATG 70115
|| || ||| || ||||| | ||||| || | ||||||||||| | ||| ||
Sbjct 876 TTGAAGTGCTCGATCGATATCGCTTCCGTGAATACCAACAGCGACACGCATGAGCATGTG 817
Query 70116 CTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTT 70175
||||||||||| | | | || ||| | ||||| || ||| ||||||||
Sbjct 816 TTGAGGTCGTTCAGCGACTCTGCCATCGATTCGGAGGAGGTAAGAACGTTCGAGAGTTTT 757
Query 70176 AAACCCAAAATAGTT 70190
|| ||||| |||||
Sbjct 756 GAAACCAAAGTAGTT 742
>seq1608
Length=13696
Score = 107 bits (118), Expect = 3e-18
Identities = 123/162 (76%), Gaps = 5/162 (3%)
Strand=Plus/Minus
Query 39665 GAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT 39724
|| || |||||||| ||||| ||||||||||| |||||||| || || | ||| ||||||
Sbjct 13557 GAGAAGGTGAGTCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATTGAAGCGAAAGAT 13498
Query 39725 CCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTA-AC---T 39780
||||| |||||||| || || || || || || || || || | ||||| | || |
Sbjct 13497 CCAGAGAAGAAGATTCCCTCAACAGCGGCGAAAGCGACGAGACGTTCTCCAAAGACTGAT 13438
Query 39781 TGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTT 39822
||| |||| | |||||||| ||||||| || || |||||
Sbjct 13437 TGT-TCATCGTTGATCCACTTGAGTGCCCAGTCGGCCTTCTT 13397
>seq174
Length=3683
Score = 91.5 bits (100), Expect = 2e-13
Identities = 128/179 (72%), Gaps = 3/179 (2%)
Strand=Plus/Plus
Query 39938 ATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCC 39997
|| ||||| ||||||||||| || || || | | ||| || || |||| || || ||
Sbjct 362 ATTTGAAACCCGTAAAAACACCTCGCCTCGGCACATTGCACTTCGGAACTGAACCTCTCG 421
Query 39998 GCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATA 40057
||||||| ||||| || || |||||||| || ||||| |||||||| || || ||
Sbjct 422 ACCAAATTCTCATTGACAATGCCATCACTCGCCGCAAAGAATGCCAACACGTGCGAAACG 481
Query 40058 AAATATTTTTCATCGGGTGTCA---ATTTATTCCAGTCATTGATATCTTTTGATATATC 40113
|||| | ||||| | || | || | |||||||| |||||||| || |||||
Sbjct 482 AAATGTCGTTCATTCGAAGTGAGGCGTTGAGTCCAGTCAAACATATCTTTCGAGATATC 540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686883968246880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |