Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq759 150 2e-31
>seq759
Length=2593
Score = 150 bits (166), Expect = 2e-31
Identities = 467/717 (65%), Gaps = 17/717 (2%)
Strand=Plus/Minus
Query 111443 TTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCC---ACC 111499
||||| ||||| ||| ||||||||| || |||| ||||| || || || || |||
Sbjct 1454 TTGGCGCGTCCTTCCTTCTCGTACTTGTTGAAGAGAGCTTCGAATTCGTCGCCGTAAACC 1395
Query 111500 GCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCA 111559
||| || || || || || | | || ||||| |||| ||| | |||| || ||
Sbjct 1394 TCGT--GA-AGTCCGGGAGCTTCAGCAGGGCAGAAGAGAGGCCAGTCACCATTCTCTTCG 1338
Query 111560 ACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCC 111619
|| ||||||||||| ||||| || ||||| |||| | |||||||| | | ||| |
Sbjct 1337 ACACGCTTCATGAAGAGGTCGGGGATCCAAAGGGCGAAGAAGAGATCACGAGCACGAACT 1278
Query 111620 TCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGC 111679
|| || | || || || ||| | || ||||| || | || || |||||||| ||
Sbjct 1277 TCCTCCTTTCCGTGATTCTTTCGGAGGTCGAGGAATTCGAAAATGTCGGCGTGCCACGGT 1218
Query 111680 TCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGC 111733
||||| |||| ||||| || ||| ||||| || |||||| || || ||
Sbjct 1217 TCAAGGTAGATTGCGAAAGCTCC---AGGACGCTTGTTTCCTCCTTGATCGACGTAACGA 1161
Query 111734 GCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCC 111793
|| ||| ||| | || |||||||| || | ||||| | || | |||||| || ||
Sbjct 1160 GCAGTGTTGTTGTAAACACGAAGCATAGGGACGATACCGTTCGAGTAACCATTGGTTCCA 1101
Query 111794 CGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCAC 111853
|| ||| | | || | | | || || | || || || || || |
Sbjct 1100 GCGATGTAAGAACCAGTCGCACGAATGTTGTGAATCGAGAGACCGATTCCTCCTGCAGTC 1041
Query 111854 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 111913
|||||||| | || || | | || || | |||||||| | ||| ||||| |||||
Sbjct 1040 TTTGAGATGAGGGCGCAAGTCTTGAGGGTGTCGTAGATACCTTCGATCGAGTCGTCCTTC 981
Query 111914 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 111973
| | || ||||||||| || | || || || || ||||| |||||||||||
Sbjct 980 ATCGTGACGAGGAAGCAAGAAGAGAGTTGAGGGTGAGGAGTTCCAGCGTTGAAGAGGGTA 921
Query 111974 GGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCA 112033
|| | ||||| |||| | || |||||| || ||| || | | | |||
Sbjct 920 GGAGAAGCGTGGGTGAAGTATCGTTCGGACATGAGGTTGTAGGTTTGAAGTGCTCGATCG 861
Query 112034 ATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATG 112093
|| || ||||| || || | ||||| ||||||| ||||| || || ||| |
Sbjct 860 ATATCGCTTCCGTGAATACCAACAGCGACACGCATGAGCATGTGTTGAGGTCGTTCAGCG 801
Query 112094 AGGATGCCATCGAGCCGTTGAAGAT-AGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149
| ||||||||| || | || | || | | || || ||||||| |||||||||
Sbjct 800 ACTCTGCCATCGATTCGGAGGAGGTAAGAACGT-TCGAGAGTTTTGAAACCAAAGTA 745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628009296643200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |