Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq759 150 2e-31 >seq759 Length=2593 Score = 150 bits (166), Expect = 2e-31 Identities = 467/717 (65%), Gaps = 17/717 (2%) Strand=Plus/Minus Query 111443 TTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCC---ACC 111499 ||||| ||||| ||| ||||||||| || |||| ||||| || || || || ||| Sbjct 1454 TTGGCGCGTCCTTCCTTCTCGTACTTGTTGAAGAGAGCTTCGAATTCGTCGCCGTAAACC 1395 Query 111500 GCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCA 111559 ||| || || || || || | | || ||||| |||| ||| | |||| || || Sbjct 1394 TCGT--GA-AGTCCGGGAGCTTCAGCAGGGCAGAAGAGAGGCCAGTCACCATTCTCTTCG 1338 Query 111560 ACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCC 111619 || ||||||||||| ||||| || ||||| |||| | |||||||| | | ||| | Sbjct 1337 ACACGCTTCATGAAGAGGTCGGGGATCCAAAGGGCGAAGAAGAGATCACGAGCACGAACT 1278 Query 111620 TCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGC 111679 || || | || || || ||| | || ||||| || | || || |||||||| || Sbjct 1277 TCCTCCTTTCCGTGATTCTTTCGGAGGTCGAGGAATTCGAAAATGTCGGCGTGCCACGGT 1218 Query 111680 TCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGC 111733 ||||| |||| ||||| || ||| ||||| || |||||| || || || Sbjct 1217 TCAAGGTAGATTGCGAAAGCTCC---AGGACGCTTGTTTCCTCCTTGATCGACGTAACGA 1161 Query 111734 GCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCC 111793 || ||| ||| | || |||||||| || | ||||| | || | |||||| || || Sbjct 1160 GCAGTGTTGTTGTAAACACGAAGCATAGGGACGATACCGTTCGAGTAACCATTGGTTCCA 1101 Query 111794 CGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCAC 111853 || ||| | | || | | | || || | || || || || || | Sbjct 1100 GCGATGTAAGAACCAGTCGCACGAATGTTGTGAATCGAGAGACCGATTCCTCCTGCAGTC 1041 Query 111854 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 111913 |||||||| | || || | | || || | |||||||| | ||| ||||| ||||| Sbjct 1040 TTTGAGATGAGGGCGCAAGTCTTGAGGGTGTCGTAGATACCTTCGATCGAGTCGTCCTTC 981 Query 111914 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 111973 | | || ||||||||| || | || || || || ||||| ||||||||||| Sbjct 980 ATCGTGACGAGGAAGCAAGAAGAGAGTTGAGGGTGAGGAGTTCCAGCGTTGAAGAGGGTA 921 Query 111974 GGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCA 112033 || | ||||| |||| | || |||||| || ||| || | | | ||| Sbjct 920 GGAGAAGCGTGGGTGAAGTATCGTTCGGACATGAGGTTGTAGGTTTGAAGTGCTCGATCG 861 Query 112034 ATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATG 112093 || || ||||| || || | ||||| ||||||| ||||| || || ||| | Sbjct 860 ATATCGCTTCCGTGAATACCAACAGCGACACGCATGAGCATGTGTTGAGGTCGTTCAGCG 801 Query 112094 AGGATGCCATCGAGCCGTTGAAGAT-AGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149 | ||||||||| || | || | || | | || || ||||||| ||||||||| Sbjct 800 ACTCTGCCATCGATTCGGAGGAGGTAAGAACGT-TCGAGAGTTTTGAAACCAAAGTA 745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628009296643200