Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq759 208 9e-49
seq1608 84.2 3e-11
>seq759
Length=2593
Score = 208 bits (230), Expect = 9e-49
Identities = 493/739 (67%), Gaps = 17/739 (2%)
Strand=Plus/Minus
Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889
||||||||||| |||||| | || | || || || ||| | | ||| || || | |
Sbjct 1541 GCATCCTTGTACAGCATGAAAGGGTTACCAGTTTCGACTTGAGCTTCGAGGATTGCGTAC 1482
Query 118890 CAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAG 118949
|| | | ||| |||| || ||||| || || || | ||||||||| || ||
Sbjct 1481 CAAAGCTTTTGAGCGGGCATCGTCTTCTTGGCGCGTCCTTCCTTCTCGTACTTGTTGAAG 1422
Query 118950 AGGGCTTCAAACTCTTCACCCACGGCCTC-TGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008
|| ||||| || || || || |||| ||| || || || || | | | ||||||||
Sbjct 1421 AGAGCTTCGAATTCGTCGCCGTAAACCTCGTGA-AGTCCGGGAGCTTCAGCAGGGCAGAA 1363
Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068
||||| ||| | |||| ||| || || ||||||||||||||||| |||||||| || ||
Sbjct 1362 GAGAGGCCAGTCACCATTCTCTTCGACACGCTTCATGAAGAGGTCGGGGATCCAAAGGGC 1303
Query 119069 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128
|||||||||| ||| ||| |||| || | || ||||| || | || | ||
Sbjct 1302 GAAGAAGAGATCACGAGCACGAACTTCCTCCTTTCCGTGATTCTTTCGGAGGTCGAGGAA 1243
Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG--- 119185
|| | || || |||||||||||||| ||||| | |||| | || | ||||
Sbjct 1242 TTCGAAAATGTCGGCGTGCCACGGTTCAAGGTAGATTGCGAAAGCTCC---AGGACGCTT 1186
Query 119186 ---ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGAT 119242
|| | || | || || | |||||| ||| | ||||||||||| || | |||
Sbjct 1185 GTTTCCTCCTTGATCGACGTAACGAGCAGTGTTGTTGTAAACACGAAGCATAGGGACGAT 1126
Query 119243 ACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGAT 119302
||| | || | ||||| || || || ||| | | || | | | ||| ||
Sbjct 1125 ACCGTTCGAGTAACCATTGGTTCCAGCGATGTAAGAACCAGTCGCACGAATGTTGTGAAT 1066
Query 119303 GTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTA 119362
| ||| || || ||||| ||||||||| | ||||| | |||| || ||||
Sbjct 1065 CGAGAGACCGATTCCTCCTGCAGTCTTTGAGATGAGGGCGCAAGTCTTGAGGGTGTCGTA 1006
Query 119363 GATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCT 119422
||| || ||||||||||| |||| | | || ||||||||| || | ||||||
Sbjct 1005 GATACCTTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCAAGAAGAGAGTTGAGGGTG 946
Query 119423 GGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTT 119482
|| || |||||||||||||| || || | |||||| |||| | || ||||||
Sbjct 945 AGGAGTTCCAGCGTTGAAGAGGGTAGGAGAAGCGTGGGTGAAGTATCGTTCGGACATGAG 886
Query 119483 GTCGTAGGTCTCCAAGACGGCGGGA---ATGTCTTCCCCGTGAATACCGATCGAGACCCG 119539
|| |||||| | ||| || || || || ||||||||||| | | ||| ||
Sbjct 885 GTTGTAGGT-TTGAAG--TGCTCGATCGATATCGCTTCCGTGAATACCAACAGCGACACG 829
Query 119540 CATAAACATGTATTGGGGT 119558
||| | ||||| ||| |||
Sbjct 828 CATGAGCATGTGTTGAGGT 810
>seq1608
Length=13696
Score = 84.2 bits (92), Expect = 3e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 130061 GAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAG 130120
|||||| || || ||||||||||| |||||||| | |||||| || | | || ||
Sbjct 13557 GAGAAGGTGAGTCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATTGAAGCGAAAGAT 13498
Query 130121 CCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAG 130174
|||||||||||||| ||||| ||| ||||| || | |||||| || |||||
Sbjct 13497 CCAGAGAAGAAGATTCCCTCAACAGCGGCGAAAGCGACGAGACGTTCTCCAAAG 13444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618412843567520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |