Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq759 165 9e-36 seq315 109 6e-19 seq1608 95.1 1e-14 >seq759 Length=2593 Score = 165 bits (182), Expect = 9e-36 Identities = 475/728 (65%), Gaps = 11/728 (2%) Strand=Plus/Plus Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGA 104288 ||||| ||||||| || || | |||||||| || || || ||| | | | | Sbjct 818 ACATGCTCATGCGTGTCGCTGTTGGTATTCACGGAAGCGATATCGATCGAGCACTTCAAA 877 Query 104289 CATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTG 104348 | ||| || |||||| || | |||| ||||| | || ||||||||||| |||| Sbjct 878 CCTACAACCTCATGTCCGAACGATACTTCACCCACGCTTCTCCTACCCTCTTCAACGCTG 937 Query 104349 GTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCA 104408 | || || || ||| | || ||||||||| || | | ||||| ||||| ||| Sbjct 938 GAACTCCTCACCCTCAACTCTCTTCTTGCTTCCTCGTCACGATGAAGGACGACTCGATCG 997 Query 104409 ACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTG 104468 | |||||||| | || || | | || || | ||||||||| || || || || | Sbjct 998 AAGGTATCTACGACACCCTCAAGACTTGCGCCCTCATCTCAAAGACTGCAGGAGGAATCG 1057 Query 104469 GGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAAT 104528 | | || || | | | || | | ||| || || || |||||| | | Sbjct 1058 GTCTCTCGATTCACAACATTCGTGCGACTGGTTCTTACATCGCTGGAACCAATGGTTACT 1117 Query 104529 CAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAG 104588 | | ||||| | || |||||||| || | ||| ||| || || || || |||||| Sbjct 1118 CGAACGGTATCGTCCCTATGCTTCGTGTTTACAACAACACTGCTCGTTACGTCGATCAAG 1177 Query 104589 CTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATA 104642 || ||||| ||| || ||||| |||| ||||| || |||||||| || | Sbjct 1178 GAGGAAACAAGCGTCCT---GGAGCTTTCGCAATCTACCTTGAACCGTGGCACGCCGACA 1234 Query 104643 TCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGAT 104701 | | || ||||| || | || || || || | ||||| | || ||| || ||| Sbjct 1235 TTTTCGAATTCCTCGACCTCCGAAAGAATCACGGAAAGGAGGAAGTTCG-TGCTCGTGAT 1293 Query 104702 CTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT 104761 ||||||| ||| || ||||| || || |||||||||||| | || || |||| ||| | Sbjct 1294 CTCTTCTTCGCCCTTTGGATCCCCGACCTCTTCATGAAGCGTGTCGAAGAGAATGGTGAC 1353 Query 104762 TGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTT 104821 ||| ||||||| || || | | || || || || ||| | || || || || Sbjct 1354 TGGCCTCTCTTCTGCCCTGCTGAAGCTCCCGGACTTCACGAGGTTTACGGCGACGAATTC 1413 Query 104822 GAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCC 104881 ||||| || | || ||||||||| | ||||| || || | |||| |||| ||| Sbjct 1414 GAAGCTCTCTTCAACAAGTACGAGAAGGAAGGACGCGCCAAGAAGACGATGCCCGCTCAA 1473 Query 104882 GATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTAC 104941 | | ||| | || || ||| | ||||| ||| ||||||| || | |||||| ||| Sbjct 1474 AAGCTTTGGTACGCAATCCTCGAAGCTCAAGTCGAAACTGGTAACCCTTTCATGCTGTAC 1533 Query 104942 AAAGACGC 104949 || || || Sbjct 1534 AAGGATGC 1541 >seq315 Length=7320 Score = 109 bits (120), Expect = 6e-19 Identities = 209/298 (70%), Gaps = 14/298 (5%) Strand=Plus/Plus Query 169201 ATCCGTCATGATCATGAGACGACCATACCGAAGC---TCGGAAACATCTTGATAGTCCTT 169257 ||| | ||||||||| |||| ||| || || ||| |||| ||| ||||| |||| Sbjct 5575 ATCTGCCATGATCATCAGACTACCGTATCGTAGCGAGTCGGTGT--TCT-GATAGACCTT 5631 Query 169258 ACCCTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTG-GTTT--GATGTGAG 169314 || ||||| | ||||| ||||| |||| | | ||||| | | |||| || || Sbjct 5632 GCCTTGTTGTAAACCCATGATCTGTTTGATAGC-TTGAATTTCGGCGTTTTCGAGCAAAG 5690 Query 169315 CTGTGTGACAGAGGCATCGCGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTA 169374 || | ||| || || ||||| || | || ||||||||||||||||| || || Sbjct 5691 CTTTTC--CAGTCGCTTCTCGAACGTTGAGCAATTTTCCACGAAGAGGGAAGACTCCATA 5748 Query 169375 GTGATCACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTC 169434 || || || || || || |||||||| | || ||||||| ||||| ||||| || || Sbjct 5749 GTTGTCGCGTCCGACAACTGAGAGACCGGATACGGCGAGAGCTTTCGCAGAGTCTCCTTC 5808 Query 169435 GGTGACGATGAGCGTACATTTTCCA-GATTGTGCCGTACCCGCCTTGTTCGCATCATC 169491 ||| | |||||| |||||||| | | ||| | ||| || || ||||| || || || Sbjct 5809 GGTCAAGATGAGGGTACATTTGCTACCATTCT-TCGTTCCTGCATTGTTGGCGTCTTC 5865 >seq1608 Length=13696 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/182 (73%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGT 94789 ||||||| || ||| ||||| || || ||||| | |||||| | ||| | | | Sbjct 13380 CAGTTCCCTGCATTGCCAAGAAGGCCGACTGGGCACTCAAGTGGATCAACGATGAACAAT 13439 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 | || ||||| || || ||| |||| || || ||||||||| ||||||||||||| Sbjct 13440 CA-GT--CTTTGGAGAACGTCTCGTCGCTTTCGCCGCTGTTGAGGGAATCTTCTTCTCTG 13496 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 | || ||| | || | |||||||||||||| ||||||||||| || ||| ||||| Sbjct 13497 GATCTTTCGCTTCAATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGACTCACCTTCT 13556 Query 94910 CC 94911 || Sbjct 13557 CC 13558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583239715122080