Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq759 203 4e-47
seq1827 86.0 7e-12
>seq759
Length=2593
Score = 203 bits (224), Expect = 4e-47
Identities = 353/508 (69%), Gaps = 4/508 (1%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| ||||| | ||||| ||||| ||| | || | | | | || |||
Sbjct 824 TCATGCGTGTCGCTGTTGGTATTCACGGAAGCGATATCGATCGAGCACTTCAAACCTACA 883
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
|| | ||| | || ||||| || ||||| | || ||||| ||||||||||| ||
Sbjct 884 ACCTCATGTCCGAACGATACTTCACCCACGCTTCTCCTACCCTCTTCAACGCTGGAACTC 943
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
||||||||| | || |||||||| || |||||||||| ||||||||||| || |
Sbjct 944 CTCACCCTCAACTCTCTTCTTGCTTCCTCGTCACGATGAAGGACGACTCGATCGAAGGTA 1003
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC- 53431
||||||| || |||||| || |||| |||||| ||| | || || |||||| ||
Sbjct 1004 TCTACGACACCCTCAAGACTTGCGCCCTCATCTCAAAGACTGCAGGAGGAATCGGTCTCT 1063
Query 53432 CACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491
| | | | ||| | ||||||| || | ||| || || || || | | |
Sbjct 1064 CGATTCAC-AACATTCGTGCGACTGGTTCTTACATCGCTGGAACCAATGGTTACTCGAAC 1122
Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551
|| ||||| |||||||| || || | ||||||||| || || |||||| | || || ||
Sbjct 1123 GGTATCGTCCCTATGCTTCGTGTTTACAACAACACTGCTCGTTACGTCGATCAAGGAGGA 1182
Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611
||||| || | ||||| |||||||| || |||||||||||||||||| | ||
Sbjct 1183 AACAAGCGTCCTGGAGCTTTCGCAATCTACCTTGAACCGTGGCACGCCGACATTTTCGAA 1242
Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTAC 53670
|| ||||| || || |||||| || | || || | || ||| ||||| || ||
Sbjct 1243 TTCCTCGACCTCCGAAAGAATCACGGAAAGGAGGAAGTTCG-TGCTCGTGATCTCTTCTT 1301
Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATG 53698
|| || ||||| || ||||||||||||
Sbjct 1302 CGCCCTTTGGATCCCCGACCTCTTCATG 1329
>seq1827
Length=8425
Score = 86.0 bits (94), Expect = 7e-12
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 158958 GTGCGTCTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGGGCTGTTGGAGCATGAGCCA 159017
||| ||||||||||| || | || || || || || || ||||| ||||| ||||
Sbjct 2434 GTGGGTCTCTCCAGTGGCGAGAACGAAATCATCGGGCTCGTCTTGTTGAAGCATACGCCA 2375
Query 159018 CATGGCCTCGACGTAATCCTGCGCGTGACCCCAGTCGCGCTTGGCATCCATGTTCCCGAG 159077
||| |||||||||| || | ||||| ||||| || |||||||| |||| ||| |||||
Sbjct 2374 CATACCCTCGACGTAGTCACGGGCGTGTCCCCAATCACGCTTGGCGTCCAAGTTACCGAG 2315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547196218141600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |