Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq1827 120 3e-22
seq759 105 8e-18
>seq1827
Length=8425
Score = 120 bits (132), Expect = 3e-22
Identities = 247/363 (68%), Gaps = 11/363 (3%)
Strand=Plus/Plus
Query 24753 GGCAAGGTGCAGGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTAT 24812
|| |||||| || || || || || ||||| ||||| || || || || ||| ||
Sbjct 2075 GGAAAGGTGGTTGAAACTCCTCAATCCGAGACTACTCCCTTCTACCCTCGTTCCCCTTAC 2134
Query 24813 GGGGTCTCAAAGGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGATA 24872
|| || | || | | ||| | |||||| ||||||||||||||| || | || ||
Sbjct 2135 GGTGTAGCGAAACTCTACGCTTTCTGGATCGTCAAGAACTACCGTGAATCCTACGGAATG 2194
Query 24873 TATGCATGCAACGGAATTCTGTTCAACCATGAGTCGGAGCGTCGGGGACCTGAATTT--G 24930
|| || |||||| || || |||||||| || || || || |||| ||| || |
Sbjct 2195 TACGCCGCCAACGGTATCCTCTTCAACCACGAATCTCCTCGACGTGGAC--GAACTTTCG 2252
Query 24931 TTACACGAAAGATTACTCTTGGTATTGACCAT---TGGATCAAG--ACAAGGGCACCTAT 24985
| || |||||||| ||| || | | | | | | | || | ||||| | ||| |
Sbjct 2253 TCACCCGAAAGATCTCTCGTGCTGTCGCCGAAATCTCGCTCGGGCAACAAGAGTGCCTCT 2312
Query 24986 TGAGCTGGGAAACCTAGATGCCAAACGTGATTGGGGGCATGCAGCCGACTACGTCGACGC 25045
| || || ||| | || ||||| ||||||||||| || || ||||||||||| |
Sbjct 2313 --ACCTCGGTAACTTGGACGCCAAGCGTGATTGGGGACACGCCCGTGACTACGTCGAGGG 2370
Query 25046 CATGTGGCGCATGCTCCAACAGAATAAGCCAGAGGATTTTGTGATCGGCACCGGTCAGAC 25105
|||||||| ||||| ||||| | |||| || ||||| || ||| ||| || ||||
Sbjct 2371 TATGTGGCGTATGCTTCAACAAGACGAGCCCGATGATTTCGTTCTCGCCACTGGAGAGAC 2430
Query 25106 GCA 25108
||
Sbjct 2431 CCA 2433
>seq759
Length=2593
Score = 105 bits (116), Expect = 8e-18
Identities = 483/750 (64%), Gaps = 41/750 (5%)
Strand=Plus/Minus
Query 81015 GTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGAT 81074
|||| ||| |||||||| |||| | ||| |||| || ||||| || | | ||||||
Sbjct 1548 GTTGGCAGCATCCTTGTACAGCATGAAAGGGTTACCAGTTTCGACTTGAGCTTCGAGGAT 1489
Query 81075 GGCGTCCCAAATCTC----GCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACAT 81130
|||| ||||| || ||| || | | | | | ||| | ||||| | |
Sbjct 1488 TGCGTACCAAAGCTTTTGAGCGGGCATCGTCTTCTTGGCGCGTCCTTCCTTCT----CGT 1433
Query 81131 ACTTGGCGTA---AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACT 81187
||||| | | ||||||| || | | | |||| || || |||| ||| ||| ||
Sbjct 1432 ACTTGTTGAAGAGAGCTTCG---AATTCGTCGCCGTAAACCTC-GTGAAGTCCGGGAGCT 1377
Query 81188 -CGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCT---ACAGCCTTCATGAAAGCG 81243
| |||||| | || ||||||| | |||||| ||| ||||||||| |
Sbjct 1376 TCAGCAGGGCAGAAGAGAGGCCAGTCAC---CATTCTCTTCGACACGCTTCATGAAGAGG 1320
Query 81244 TCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTT 81302
|| |||||||| |||||| ||| || || || ||| || | ||||| | || || ||
Sbjct 1319 TCGGGGATCCAAAGGGCGAAGAAGAGATCACGAGCA-CGAACTTCCTCCTTTCCGTGATT 1261
Query 81303 GAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGAT 81362
|| | ||||| || || | ||||| || ||||| || || || || | ||||
Sbjct 1260 CTTTCGGAGGTCGAGGAATTCGAAAATGTCGGCGTGCCACGGTTCAAGGTAGATTGCGAA 1201
Query 81363 CGACCCCTTGCGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACG 81419
| || || | || || || | ||||||||| ||||| ||| | |||||
Sbjct 1200 AGCTCCAGGACGCTTGTTTCCTCCTTGATCGACGTAACGAGCAGTGTTGTTGTAAACACG 1141
Query 81420 CAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGC 81479
| |||||||| |||||| | || | ||| || || || |||| || || | ||
Sbjct 1140 AAGCATAGGGACGATACCGTTCGAGTAACCATTGGTTCCAGCGATGTAAGAACCAGTCGC 1081
Query 81480 GCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCG 81539
|| | ||| || || |||||||| || |||| |||||| || | || ||
Sbjct 1080 ACGAATGTTGTGAATCGAGAGACCGATTCCTCCTGCAGTCTTTGAGATGAGGGCGCAAGT 1021
Query 81540 GTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCAT-GTCAAGCAAGAAACAGC 81598
|| | ||| || || || || ||||| || | ||||| || | | | ||| ||
Sbjct 1020 CTTGAGGGTGTCGTAGATACCTTCGATCGAGTCGTCCTTCATCGTGACG-AGGAAGCAAG 962
Query 81599 TTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAA 81656
|| | |||||| | ||| || || ||||| || || || | ||||| ||||
Sbjct 961 AAGAGAGTTGAGGG--TGAGGAGTTCCAGCGTTGAAGAGGGTAGGAGAAGCGTGGGTGAA 904
Query 81657 ATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCG-TGGA---ATATCGTCACCGT 81712
|| || | ||||| |||| ||||||| || | | | || |||||| ||||
Sbjct 903 GTATCGTTCGGACATGAGGTTGTAGGTTT----GAAGTGCTCGATCGATATCGCTTCCGT 848
Query 81713 GAATACCGATAGCTACACGCATAAACATGT 81742
||||||| | ||| |||||||| | |||||
Sbjct 847 GAATACCAACAGCGACACGCATGAGCATGT 818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570289783279040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |