Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016- 12-23] 2,892 sequences; 16,339,983 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq759 109 1e-18 seq2191 86.0 1e-11 >seq759 Length=2593 Score = 109 bits (120), Expect = 1e-18 Identities = 171/245 (70%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 178121 GCATCTTTGTACGCAATGAAGGGCATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGC 178180 ||||| |||||| ||||| || | || || ||||||| |||| || | | Sbjct 1541 GCATCCTTGTACAGCATGAAAGGGTTACCAGTTTCGACTTGAGCTTCGAGGATTGCGTAC 1482 Query 178181 CAAAGCTCCTGGGCTCGGACAGTCTTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAG 178240 ||||||| || || | | ||||| ||||| |||||| ||||||||||| ||| || Sbjct 1481 CAAAGCTTTTGAGCGGGCATCGTCTTCTTGGCGCGTCCTTCCTTCTCGTACTTGTTGAAG 1422 Query 178241 AGCTCCTCGAATTCCGGTCCATAGACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAG 178300 || | |||||||| || || || || | || |||||||| ||| ||||||||| Sbjct 1421 AGAGCTTCGAATTCGTCGCCGTAAACCTCGTGAAGTCCGGGAGCTTCAGCAGGGCAGAAG 1362 Query 178301 AGACTCCACTGACCGTCTTCCTTCACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCA 178360 ||| ||| | ||| | || | || || |||||||||||||| | | |||| | ||| Sbjct 1361 AGAGGCCAGTCACCATTCTCTTCGACACGCTTCATGAAGAGGTCGGGGATCCAAAGGGCG 1302 Query 178361 TAGAA 178365 |||| Sbjct 1301 AAGAA 1297 >seq2191 Length=13419 Score = 86.0 bits (94), Expect = 1e-11 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 139806 CCTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAA 139865 ||| |||||||||||||| | |||||||||||||| || ||||| | |||| |||| Sbjct 326 CCTCCCAAAGAAGCACGGTCGTGGAGGACAATCTGCACTTCGTTTCGCCCGACTCCGAAT 385 Query 139866 GGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAA 139925 ||| || | ||||||||| | | || || || || ||||| |||| ||| |||| Sbjct 386 GGAGAAACGTCACAACTACGTTCGCAAGGTCGCCGAACACGCAGTACAACATTTCATCAC 445 Query 139926 AGACAACAAG 139935 ||| ||||| Sbjct 446 GGACGACAAG 455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159109049071580