Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq759 109 1e-18
seq2191 86.0 1e-11
>seq759
Length=2593
Score = 109 bits (120), Expect = 1e-18
Identities = 171/245 (70%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 178121 GCATCTTTGTACGCAATGAAGGGCATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGC 178180
||||| |||||| ||||| || | || || ||||||| |||| || | |
Sbjct 1541 GCATCCTTGTACAGCATGAAAGGGTTACCAGTTTCGACTTGAGCTTCGAGGATTGCGTAC 1482
Query 178181 CAAAGCTCCTGGGCTCGGACAGTCTTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAG 178240
||||||| || || | | ||||| ||||| |||||| ||||||||||| ||| ||
Sbjct 1481 CAAAGCTTTTGAGCGGGCATCGTCTTCTTGGCGCGTCCTTCCTTCTCGTACTTGTTGAAG 1422
Query 178241 AGCTCCTCGAATTCCGGTCCATAGACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAG 178300
|| | |||||||| || || || || | || |||||||| ||| |||||||||
Sbjct 1421 AGAGCTTCGAATTCGTCGCCGTAAACCTCGTGAAGTCCGGGAGCTTCAGCAGGGCAGAAG 1362
Query 178301 AGACTCCACTGACCGTCTTCCTTCACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCA 178360
||| ||| | ||| | || | || || |||||||||||||| | | |||| | |||
Sbjct 1361 AGAGGCCAGTCACCATTCTCTTCGACACGCTTCATGAAGAGGTCGGGGATCCAAAGGGCG 1302
Query 178361 TAGAA 178365
||||
Sbjct 1301 AAGAA 1297
>seq2191
Length=13419
Score = 86.0 bits (94), Expect = 1e-11
Identities = 97/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 139806 CCTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAA 139865
||| |||||||||||||| | |||||||||||||| || ||||| | |||| ||||
Sbjct 326 CCTCCCAAAGAAGCACGGTCGTGGAGGACAATCTGCACTTCGTTTCGCCCGACTCCGAAT 385
Query 139866 GGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAA 139925
||| || | ||||||||| | | || || || || ||||| |||| ||| ||||
Sbjct 386 GGAGAAACGTCACAACTACGTTCGCAAGGTCGCCGAACACGCAGTACAACATTTCATCAC 445
Query 139926 AGACAACAAG 139935
||| |||||
Sbjct 446 GGACGACAAG 455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159109049071580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |