Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20FNED7-22_20[genbank_20GCA_5F001914285.1_202016-
12-23] 2,892 sequences; 16,339,983 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq759 212 9e-50
seq1608 95.1 2e-14
seq174 87.8 3e-12
>seq759
Length=2593
Score = 212 bits (234), Expect = 9e-50
Identities = 378/552 (68%), Gaps = 0/552 (0%)
Strand=Plus/Minus
Query 76579 CCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 76638
||| ||||||| || | || || ||||| ||||| || || ||||| || || | ||
Sbjct 1356 CCAGTCACCATTCTCTTCGACACGCTTCATGAAGAGGTCGGGGATCCAAAGGGCGAAGAA 1297
Query 76639 TAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCAT 76698
||||| || | | | ||| || ||||| ||||||| || || ||||| || |
Sbjct 1296 GAGATCACGAGCACGAACTTCCTCCTTTCCGTGATTCTTTCGGAGGTCGAGGAATTCGAA 1237
Query 76699 AATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCC 76758
||| || | ||||| ||||| || || || || | | | || || || || || |||||
Sbjct 1236 AATGTCGGCGTGCCACGGTTCAAGGTAGATTGCGAAAGCTCCAGGACGCTTGTTTCCTCC 1177
Query 76759 CTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGA 76818
||||| | || | |||||||| || ||||| | | ||| || | || ||||| ||
Sbjct 1176 TTGATCGACGTAACGAGCAGTGTTGTTGTAAACACGAAGCATAGGGACGATACCGTTCGA 1117
Query 76819 TGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCC 76878
|||||| ||||||| || ||| ||| |||||||| || ||| || || ||
Sbjct 1116 GTAACCATTGGTTCCAGCGATGTAAGAACCAGTCGCACGAATGTTGTGAATCGAGAGACC 1057
Query 76879 TATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTC 76938
||||||||||| | || ||||| || || || || | ||||| ||||| || ||
Sbjct 1056 GATTCCTCCTGCAGTCTTTGAGATGAGGGCGCAAGTCTTGAGGGTGTCGTAGATACCTTC 997
Query 76939 TATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 76998
|| || ||| |||| | | || || || ||| | |||| | ||| ||||||
Sbjct 996 GATCGAGTCGTCCTTCATCGTGACGAGGAAGCAAGAAGAGAGTTGAGGGTGAGGAGTTCC 937
Query 76999 TGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGT 77058
|| || || | |||||||| || || ||||| || ||| || | || ||||| ||
Sbjct 936 AGCGTTGAAGAGGGTAGGAGAAGCGTGGGTGAAGTATCGTTCGGACATGAGGTTGTAGGT 877
Query 77059 TTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATG 77118
|| || || || ||||| | | ||||| || |||||||||||||| | ||| ||
Sbjct 876 TTGAAGTGCTCGATCGATATCGCTTCCGTGAATACCAACAGCGACACGCATGAGCATGTG 817
Query 77119 CTGAGGTCGTTC 77130
|||||||||||
Sbjct 816 TTGAGGTCGTTC 805
>seq1608
Length=13696
Score = 95.1 bits (104), Expect = 2e-14
Identities = 87/110 (79%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 46678 GAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGAT 46737
|| || ||||| || ||||| || |||||||| |||||||| || || | |||||||||
Sbjct 13557 GAGAAGGTGAGTCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATTGAAGCGAAAGAT 13498
Query 46738 CCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCC 46787
||||| ||||| || || || ||||| ||||| ||||| || | |||||
Sbjct 13497 CCAGAGAAGAAGATTCCCTCAACAGCGGCGAAAGCGACGAGACGTTCTCC 13448
>seq174
Length=3683
Score = 87.8 bits (96), Expect = 3e-12
Identities = 127/179 (71%), Gaps = 3/179 (2%)
Strand=Plus/Plus
Query 46951 ATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCA 47010
|| ||||| ||||||||||| || || || | | || || || | || || | ||
Sbjct 362 ATTTGAAACCCGTAAAAACACCTCGCCTCGGCACATTGCACTTCGGAACTGAACCTCTCG 421
Query 47011 GACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATA 47070
|||||||||||| || || |||||||| || ||||| |||||||| || || ||
Sbjct 422 ACCAAATTCTCATTGACAATGCCATCACTCGCCGCAAAGAATGCCAACACGTGCGAAACG 481
Query 47071 AAATATTTTTCATCGGTAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATC 47126
|||| | ||||| | ||| | ||| | |||||||| |||||||| || |||||
Sbjct 482 AAATGTCGTTCATTCGAAGTGAGGCGTTGAGTCCAGTCAAACATATCTTTCGAGATATC 540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712908627421440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |