Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20sp._20JG-1b_20[genbank_20GCA_5F001541205.1_202016-01-
26] 156 sequences; 19,393,393 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq10 82.4 9e-11
>seq10
Length=415605
Score = 82.4 bits (90), Expect = 9e-11
Identities = 399/635 (63%), Gaps = 0/635 (0%)
Strand=Plus/Plus
Query 53990 TCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCA 54049
||| | || || | || || |||||| ||| | || || |||| ||| || || ||
Sbjct 14722 TCAGCGGGGCAGAACAGCGGCCACTCGGCGTTCTGCTCGACGCGTTCCATGAACAGGTCG 14781
Query 54050 GGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTT 54109
|| ||||| || || | || || |||| | | ||| || || || |||||
Sbjct 14782 GGGATCCACAGCGCGAAGAAGAGGTCTCGCGCGCGGACTTCTTCCTTGCCGTGGTTCTTG 14841
Query 54110 TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACT 54169
|| |||||||| | | || || | |||||||| || | ||| || | | |
Sbjct 14842 CGGAGGTCGAGGAAGTCGAAGATGTCGGCGTGCCACGGCTCAAGGTAGATCGCGAACGCG 14901
Query 54170 CCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 54229
|| || || ||||| ||||| || || | ||| | || ||||| || | || | | |
Sbjct 14902 CCGGGTCGCTTGTTGCCTCCTTGGTCCACGTAACGCGCCGTGTTGTTGAAGACGCGGAGC 14961
Query 54230 ATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGA 54289
|| || | || ||||| || || || || |||| ||| || || | || ||
Sbjct 14962 ATAGGCACGATGCCATTCGAGTAGCCGTTCGTGCCGGCGATGTACGAACCGGTCGCGCGG 15021
Query 54290 ATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT 54349
|| || ||| || ||||| ||||| || || | || ||||| | ||||| ||
Sbjct 15022 ATGTTGTGAATCGAAAGACCGATCCCGCCCGCAGTCTTGGAGATGAGCGCGCAAGTCTTG 15081
Query 54350 AACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGAC 54409
| ||| || |||||||| || || || ||| |||| | | || || ||| ||
Sbjct 15082 AGCGTGTCGTAGATGCCTTCGATCGAGTCGTCCTGCATGGTGACGAGGAAGCAGGACGAG 15141
Query 54410 ATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 54469
| ||| | || || || || || || | || || || ||||| || || |
Sbjct 15142 AGTTGCGGGTGAGGGGTACCGGCGTTGAACAGCGTGGGCGACGCGTGAGTGAAGTAGCGC 15201
Query 54470 TCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACT 54529
|| || | | ||||| || |||||||| | || || | || || || ||
Sbjct 15202 TCCGACATCAAGTTGTAGGTTTCGATAGCACGCTTGATGTCGGGTCCGTGGATGCCGACG 15261
Query 54530 GCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAG 54589
|| || ||||| | |||||||||||| | || | | ||| || || ||||||
Sbjct 15262 GCAACGCGCATGAGCATGTGCTGAGGACGCTCCGCCACTTTGCCGTCGATCCGCAGCAAA 15321
Query 54590 TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 54624
|| || || | |||||| ||||| || |||||
Sbjct 15322 TACGAGCGCTCGAGAGTTTTGAAACCGAAGTAGTT 15356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593720442242880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |