Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20JG-1b_20[genbank_20GCA_5F001541205.1_202016-01- 26] 156 sequences; 19,393,393 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq8 114 2e-20 >seq8 Length=472973 Score = 114 bits (126), Expect = 2e-20 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 145664 TCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCA 145723 |||| | || ||| || ||| ||||| ||||||| |||||||||||| ||||| || | Sbjct 389627 TCCTCGCGAGTTGGGTCTGCAGCGGCTCGACGTGGTCGAGGTAGACGTGGGCGTCTCCGA 389568 Query 145724 GGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCA 145783 | | ||||||| || ||| | | | |||| | |||||| ||||| |||| | Sbjct 389567 GTTGGAGGATGAATTCGTGGGGGACCGTGTCGGTGACGAGGGCGATCATGTGCGTCAAGA 389508 Query 145784 GGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACA 145843 ||| ||| || ||||||||||| || || || || | ||| ||||||| ||||||| Sbjct 389507 GGGCGTACGAAGCGATGTTGAAGGGGACGCCGAGTCCGAGGTCGGCCGAGCGTTGGTACA 389448 Query 145844 GCTGGCAGGAGAG 145856 | |||||||||| Sbjct 389447 TCAGGCAGGAGAG 389435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075649350240