Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20JG-1b_20[genbank_20GCA_5F001541205.1_202016-01- 26] 156 sequences; 19,393,393 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq10 96.9 7e-15 >seq10 Length=415605 Score = 96.9 bits (106), Expect = 7e-15 Identities = 176/255 (69%), Gaps = 2/255 (1%) Strand=Plus/Plus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| || || |||||||||||||||| || ||| || || || || || || Sbjct 15040 CCGATCCCGCCCGCAGTCTTGGAGATGAGCGCGCAAGTCTTGAGCGTGTCGTAGATGCCT 15099 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG-GGGTGTGACTGT 94904 || || || || || | | | |||||||| || || ||||| ||||| | || Sbjct 15100 TCGATCGAGTCGTCCTGCATGGTGACGAGGAAGCAGGACGAGAGTTGCGGGTGAG-GGGT 15158 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 || || ||||| ||||| || || || || || ||| || |||||| | | || Sbjct 15159 ACCGGCGTTGAACAGCGTGGGCGACGCGTGAGTGAAGTAGCGCTCCGACATCAAGTTGTA 15218 Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 ||||| || || |||||||| | |||||| |||||||| || || ||||| | ||| Sbjct 15219 GGTTTCGATAGCACGCTTGATGTCGGGTCCGTGGATGCCGACGGCAACGCGCATGAGCAT 15278 Query 95025 GTCCTGAGGGCGCTC 95039 || |||||| ||||| Sbjct 15279 GTGCTGAGGACGCTC 15293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989582022068980