Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20sp._20JG-1b_20[genbank_20GCA_5F001541205.1_202016-01- 26] 156 sequences; 19,393,393 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq8 86.0 5e-12 >seq8 Length=472973 Score = 86.0 bits (94), Expect = 5e-12 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 20923 GCAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTC 20982 |||| || || ||||||| | ||| ||||||||||| || | | | | || || Sbjct 389609 GCAGCGGCTCGACGTGGTCGAGGTAGACGTGGGCGTCTCCGAGTTGGAGGATGAATTCGT 389550 Query 20983 CCGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGT 21042 ||| | | | |||||| | ||||||| | ||||| ||||||||| ||||||| Sbjct 389549 GGGGGACCGTGTCGGTGACGAGGGCGATCATGTGCGTCAAGAGGGCGTACGAAGCGATGT 389490 Query 21043 TAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAG 21097 | || ||||| ||||| || | |||||| || | ||||||| | ||||||| || Sbjct 389489 TGAAGGGGACGCCGAGTCCGAGGTCGGCCGAGCGTTGGTACATCAGGCAGGAGAG 389435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775186690880